Shama Parveen Mirza PhD Online Profile
Assistant Professor
Medical College of Wisconsin
Department: Biochemistry
Program: Protein Nucleic Acid Facility
Publications
Human cytomegalovirus pUL97 regulates the viral MIE promoter by phosphorylation-mediated disruption of HDAC1 binding. (Bigley TM, Reitsma JM, Mirza SP, Terhune SS) J Virol 2013 Apr 24: PMID 23616659 Quantitative mass spectrometry-based approaches in cardiovascular research. (Mirza SP) Circ Cardiovasc Genet 2012 Aug 1;5(4):477 PMID 22896015 Hydronephrosis: a view from the inside. (Mesrobian HG, Mirza SP) Pediatr Clin North Am 2012 Aug;59(4):839-51 PMID 22857832 p38γ Mitogen-activated protein kinase signals through phosphorylating its phosphatase PTPH1 in regulating ras protein oncogenesis and stress response. (Hou S, Suresh PS, Qi X, Lepp A, Mirza SP, Chen G) J Biol Chem 2012 Aug 10;287(33):27895-905 PMID 22730326 Sequence-specific capture of protein-DNA complexes for mass spectrometric protein identification. (Wu CH, Chen S, Shortreed MR, Kreitinger GM, Yuan Y, Frey BL, Zhang Y, Mirza S, Cirillo LA, Olivier M, Smith LM) PLoS One 2011;6(10):e26217 PMID 22028835 Sequential abundant ion fragmentation analysis (SAIFA): an alternative approach for phosphopeptide identification using an ion trap mass spectrometer. (Chesnik M, Halligan B, Olivier M, Mirza SP) Anal Biochem 2011 Nov 15;418(2):197-203 PMID 21855524 Identification of phosphorylation sites on extracellular corneal epithelial cell maspin. (Narayan M, Mirza SP, Twining SS) Proteomics 2011 Apr;11(8):1382-90 PMID 21365746 Integrated approach for the comprehensive characterization of lipoproteins from human plasma using FPLC and nano-HPLC-tandem mass spectrometry. (Collins LA, Mirza SP, Kissebah AH, Olivier M) Physiol Genomics 2010 Feb 4;40(3):208-15 PMID 19903763 Identification of cell surface markers to differentiate rat endothelial and fibroblast cells using lectin arrays and LC-ESI-MS/MS. (Lee JE, Mirza SP, Didier DN, Scalf M, Olivier M, Greene AS, Smith LM) Anal Chem 2008 Nov 1;80(21):8269-75 PMID 18821777 18O labeling over a coffee break: a rapid strategy for quantitative proteomics. (Mirza SP, Greene AS, Olivier M) J Proteome Res 2008 Jul;7(7):3042-8 PMID 18510357 Methods and approaches for the comprehensive characterization and quantification of cellular proteomes using mass spectrometry. (Mirza SP, Olivier M) Physiol Genomics 2008 Mar 14;33(1):3-11 PMID 18162499 Visualizing quantitative proteomics datasets using Treemaps (B. D. Halligan, S. P. Mirza, M. C. Pellitteri-Hahn, M. Olivier, and A. S. Greene ) Information Visualization Improved method for the analysis of membrane proteins by mass spectrometry. (Mirza SP, Halligan BD, Greene AS, Olivier M) Physiol Genomics 2007 Jun 19;30(1):89-94 PMID 17341690 A clean, more efficient method for in-solution digestion of protein mixtures without detergent or urea. (Kim SC, Chen Y, Mirza S, Xu Y, Lee J, Liu P, Zhao Y) J Proteome Res 2006 Dec;5(12):3446-52 PMID 17137347 Improved mass spectrometric proteomic profiling of the secretome of rat vascular endothelial cells. (Pellitteri-Hahn MC, Warren MC, Didier DN, Winkler EL, Mirza SP, Greene AS, Olivier M) J Proteome Res 2006 Oct;5(10):2861-4 PMID 17022658 Mass spectral study of meso-alkyl and meso-cycloalkyl calix(4)pyrroles under electron impact conditions. (Prabhakar S, Radha Kishan M, Mirza SP, Raghavan KV, Vairamani M) Rapid Commun Mass Spectrom 2004;18(18):2077-86 PMID 15378721 Electron transfer reaction of oxo(salen)chromium(V) ion with anilines. (Premsingh S, Venkataramanan NS, Rajagopal S, Mirza SP, Vairamani M, Rao PS, Velavan K) Inorg Chem 2004 Sep 6;43(18):5744-53 PMID 15332827 5-Amino-2-mercapto-1,3,4-thiadiazole: a new matrix for the efficient matrix-assisted laser desorption/ionization of neutral carbohydrates (S. P. Mirza, N. P. Raju, S. S. Madhavendra and M. Vairamani ) Rapid Commun Mass Spectrom Estimation of the proton affinity values of fifteen matrix-assisted laser desorption/ionization matrices under electrospray ionization conditions using the kinetic method. (Mirza SP, Raju NP, Vairamani M) J Am Soc Mass Spectrom 2004 Mar;15(3):431-5 PMID 14998547 The kinetic method reveals secondary deuterium isotope effects on the proton affinity and gas-phase basicity of glycine and alanine methyl esters (S. P. Mirza, P. Krishna, S. Prabhakar and M. Vairamani, D. Giblin and Michael L. Gross ) Int. J. Mass Spectrom Mass spectral studies of N,N-dialkylaminoethanols. (Reddy TJ, Mirza SP, Saradhi UV, Rao VJ, Vairamani M) Rapid Commun Mass Spectrom 2003;17(7):746-52 PMID 12661030 Mass spectral study of O- and S-aryl dimethylthiocarbamates under electron impact conditions: Newman-Kwart rearrangement in the gas phase (S. Prabhakar, P. Kar, S. P. Mirza, V.V.S. Laxmi, K. Nagaiah and M. Vairamani ) Rapid Commun Mass Spectrom 5-Ethyl-2-mercaptothiazole as matrix for matrix-assisted laser desorption/ionization of a broad spectrum of analytes in positive and negative ion mode. (Raju NP, Mirza SP, Vairamani M, Ramulu AR, Pardhasaradhi M) Rapid Commun Mass Spectrom 2001;15(19):1879-84 PMID 11565107 Estimation of proton affinity of proline and tryptophan under electrospray ionization conditions using the extended kinetic method. (Mirza SP, Prabhakar S, Vairamani M) Rapid Commun Mass Spectrom 2001;15(12):957-62 PMID 11400203 Claisen rearrangement of allyl phenyl ether and its sulfur and selenium analogues on electron impact (Prabhakar S, Mirza SP, Kundu A, Roy S, Vairamani M) Rapid Commun Mass Spectrom 2000;14(13):1116-22 PMID 10867686 Grants and Awards
A Priori Identification of Bevacizumab Response in Recurrent GBM (#9207882 01/01/2013 - 12/31/2013) Sponsor: Froedtert Hospital FoundationAdvancing New Discoveries in Translational Research Through the Collaborative and Pilot Studies Program (#9520196 04/01/2011 - 03/31/2016) PI of Image-Guided Proteomics of Glioblastoma Multiforme - Moving Towards Personalized Medicine (#5520235)
