Medical College of Wisconsin
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Elisson Lopes

Elisson Lopes profile photo picture

Postdoctoral Researcher 1

Institution: Medical College of Wisconsin
Department: Pediatrics
Division: Pediatrics Bioinformatics and Quantitative Child Health

Member of the Cancer Center

Publications (9)

  • Single amino-acid differences define H2B variants and modify chromatin accessibility to induce EMT in breast cancer. (Dhahri H, Lau KH, Saintilnord WN, Lopes E, Damico HN, Hegazy YA, Palma FR, Melters DP, Chandler DP, Dalal Y, Licht JD, Bonini MG, Fondufe-Mittendorf YN) Oncogene 2026 Feb;45(6):669-689 PMID: 41580505 PMCID: PMC12867764 SCOPUS ID: 2-s2.0-105028749507 01/25/2026    
  • Aberrant expression of histone H2B variants reshape chromatin and alter oncogenic gene expression programs. (Saintilnord WN, Hegazy YA, Chesnutt K, Eckstein M, Cassidy RN, Dhahri H, Bennett RL, Melters DP, Lopes E, Fu Z, Lau K, Chandler DP, Poirier MG, Dalal Y, Licht JD, Fondufe-Mittendorf Y) bioRxiv 2024 Nov 21 PMID: 39605447 PMCID: PMC11601509 11/28/2024    
  • WikiPathways 2024: next generation pathway database. (Agrawal A, Balcı H, Hanspers K, Coort SL, Martens M, Slenter DN, Ehrhart F, Digles D, Waagmeester A, Wassink I, Abbassi-Daloii T, Lopes EN, Iyer A, Acosta JM, Willighagen LG, Nishida K, Riutta A, Basaric H, Evelo CT, Willighagen EL, Kutmon M, Pico AR) Nucleic Acids Res 2024 Jan 05;52(D1):D679-D689 PMID: 37941138 PMCID: PMC10767877 SCOPUS ID: 2-s2.0-85181632569 11/09/2023       326 Citations
  • In silico and in vitro arboviral MHC class I-restricted-epitope signatures reveal immunodominance and poor overlapping patterns. (Lopes-Ribeiro Á, Araujo FP, Oliveira PM, Teixeira LA, Ferreira GM, Lourenço AA, Dias LCC, Teixeira CW, Retes HM, Lopes ÉN, Versiani AF, Barbosa-Stancioli EF, da Fonseca FG, Martins-Filho OA, Tsuji M, Peruhype-Magalhães V, Coelho-Dos-Reis JGA) Front Immunol 2022;13:1035515 PMID: 36466864 PMCID: PMC9713826 SCOPUS ID: 2-s2.0-85143318108 12/06/2022       8 Citations
  • Ten simple rules for creating reusable pathway models for computational analysis and visualization. (Hanspers K, Kutmon M, Coort SL, Digles D, Dupuis LJ, Ehrhart F, Hu F, Lopes EN, Martens M, Pham N, Shin W, Slenter DN, Waagmeester A, Willighagen EL, Winckers LA, Evelo CT, Pico AR) PLoS Comput Biol 2021 Aug;17(8):e1009226 PMID: 34411100 PMCID: PMC8375987 SCOPUS ID: 2-s2.0-85113392168 08/20/2021       12 Citations
  • Promoting Responsible Research and Innovation (RRI) During Brazilian Activities of Genomic and Epidemiological Surveillance of Arboviruses. (Giovanetti M, Alcantara LCJ, Dorea AS, Ferreira QR, Marques WA, Junior Franca de Barros J, Adelino TER, Tosta S, Fritsch H, Iani FCM, Mares-Guia MA, Salgado A, Fonseca V, Xavier J, Lopes EN, Soares GC, de Castro Amarante MF, Azevedo V, Kruger A, Correa Matta G, Paineiras-Domingos LL, Colonnello C, Bispo de Filippis AM, Montesano C, Colizzi V, Barreto FK) Front Public Health 2021;9:693743 PMID: 34277552 PMCID: PMC8282202 SCOPUS ID: 2-s2.0-85110420866 07/20/2021       6 Citations
  • Betacoronaviruses genome analysis reveals evolution toward specific codons usage: Implications for SARS-CoV-2 mitigation strategies. (Lopes EN, Fonseca V, Frias D, Tosta S, Salgado Á, Assunção Vialle R, Paulo Eduardo TS, Barreto FK, Ariston de Azevedo V, Guarino M, Angeletti S, Ciccozzi M, Junior Alcantara LC, Giovanetti M) J Med Virol 2021 Sep;93(9):5630-5634 PMID: 33934387 PMCID: PMC8242727 SCOPUS ID: 2-s2.0-85106330350 05/03/2021       3 Citations
  • Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil. (Adelino TÉR, Giovanetti M, Fonseca V, Xavier J, de Abreu ÁS, do Nascimento VA, Demarchi LHF, Oliveira MAA, da Silva VL, de Mello ALES, Cunha GM, Santos RH, de Oliveira EC, Júnior JAC, de Melo Iani FC, de Filippis AMB, de Abreu AL, de Jesus R, de Albuquerque CFC, Rico JM, do Carmo Said RF, Silva JA, de Moura NFO, Leite P, Frutuoso LCV, Haddad SK, Martínez A, Barreto FK, Vazquez CC, da Cunha RV, Araújo ELL, de Oliveira Tosta SF, de Araújo Fabri A, Chalhoub FLL, da Silva Lemos P, de Bruycker-Nogueira F, de Castro Lichs GG, Zardin MCSU, Segovia FMC, Gonçalves CCM, Grillo ZDCF, Slavov SN, Pereira LA, Mendonça AF, Pereira FM, de Magalhães JJF, Dos Santos Júnior ACM, de Lima MM, Nogueira RMR, Góes-Neto A, de Carvalho Azevedo VA, Ramalho DB, Oliveira WK, Macario EM, de Medeiros AC, Pimentel V, Latin American Genomic Surveillance Arboviral Network, Holmes EC, de Oliveira T, Lourenço J, Alcantara LCJ) Nat Commun 2021 Apr 16;12(1):2296 PMID: 33863880 PMCID: PMC8052316 SCOPUS ID: 2-s2.0-85104412509 04/18/2021       44 Citations
  • WikiPathways: connecting communities. (Martens M, Ammar A, Riutta A, Waagmeester A, Slenter DN, Hanspers K, A Miller R, Digles D, Lopes EN, Ehrhart F, Dupuis LJ, Winckers LA, Coort SL, Willighagen EL, Evelo CT, Pico AR, Kutmon M) Nucleic Acids Res 2021 Jan 08;49(D1):D613-D621 PMID: 33211851 PMCID: PMC7779061 SCOPUS ID: 2-s2.0-85099429023 11/20/2020       635 Citations
    • Last update: 06/12/2026