Medical College of Wisconsin
CTSIResearch InformaticsREDCap

Sequence specificity in aflatoxin B1--DNA interactions. Proc Natl Acad Sci U S A 1983 Jan;80(1):6-10

Date

01/01/1983

Pubmed ID

6218504

Pubmed Central ID

PMC393298

DOI

10.1073/pnas.80.1.6

Scopus ID

2-s2.0-0342587337 (requires institutional sign-in at Scopus site)   119 Citations

Abstract

The activated form of aflatoxin B1 (AFB1) causes covalent modification primarily of guanine residues, leading to alkali-labile sites in DNA. A simple extension of the Maxam-Gilbert procedure for sequence analysis permits the identification of alkali-labile sites induced by AFB1 and determination of the frequency of alkali-labile AFB1 modifications at particular sites on a DNA fragment of known sequence. Using this strategy, we have investigated the influence of flanking nucleotide sequences on AFB1 modification in a number of DNA fragments of known sequence. Our results show that certain guanine residues in double-stranded DNA are preferentially attacked by AFB1 over others in a manner predictable from a knowledge of vicinal nucleotide sequences. The observed in vitro sequence specificity is independent of a number of tested parameters and is likely to occur in vivo.

Author List

Muench KF, Misra RP, Humayun MZ

Author

Ravindra P. Misra PhD, MD Associate Provost, Professor in the Biochemistry department at Medical College of Wisconsin




MESH terms used to index this publication - Major topics in bold

Aflatoxins
Bacteriophage phi X 174
Base Sequence
Binding Sites
DNA
Guanine
Plasmids