1 | A comprehensive assessment of selective amino acid 15N-labeling in human embryonic kidney 293 cells for NMR spectroscopy. (Subedi GP, Roberts ET, Davis AR, Kremer PG, Amster IJ, Barb AW) J Biomol NMR 2024 Jun;78(2):125-132 3 Citations |
1 | Botulinum Neurotoxin A4 Has a 1000-Fold Reduced Potency Due to Three Single Amino Acid Alterations in the Protein Receptor Binding Domain. (Tepp WH, Bradshaw M, Gardner AP, Kaufman RL, Barbieri JT, Pellett S) Int J Mol Sci 2023 Mar 16;24(6) 3 Citations |
1 | De novo design of small beta barrel proteins. (Kim DE, Jensen DR, Feldman D, Tischer D, Saleem A, Chow CM, Li X, Carter L, Milles L, Nguyen H, Kang A, Bera AK, Peterson FC, Volkman BF, Ovchinnikov S, Baker D) Proc Natl Acad Sci U S A 2023 Mar 14;120(11):e2207974120 11 Citations |
2 | A single F153Sβ3 mutation causes constitutive integrin αIIbβ3 activation in a variant form of Glanzmann thrombasthenia. (Koukouritaki SB, Thinn AMM, Ashworth KJ, Fang J, Slater HS, Du LM, Nguyen HTT, Pillois X, Nurden AT, Ng CJ, Di Paola J, Zhu J, Wilcox DA) Blood Adv 2023 Jul 11;7(13):3180-3191 2 Citations |
1 | Identification of amino acid domains of Borrelia burgdorferi P66 that are surface exposed and important for localization, oligomerization, and porin function of the protein. (Curtis MW, Fierros CH, Hahn BL, Surdel MC, Kessler J, Anderson PN, Vandewalle-Capo M, Bonde M, Zhu J, Bergström S, Coburn J) Front Cell Infect Microbiol 2022;12:991689 3 Citations |
1 | De novo coding variants in the AGO1 gene cause a neurodevelopmental disorder with intellectual disability. (Schalk A, Cousin MA, Dsouza NR, Challman TD, Wain KE, Powis Z, Minks K, Trimouille A, Lasseaux E, Lacombe D, Angelini C, Michaud V, Van-Gils J, Spataro N, Ruiz A, Gabau E, Stolerman E, Washington C, Louie R, Lanpher BC, Kemppainen JL, Innes M, Kooy F, Meuwissen M, Goldenberg A, Lecoquierre F, Vera G, Diderich KEM, Sheidley B, El Achkar CM, Park M, Hamdan FF, Michaud JL, Lewis AJ, Zweier C, Reis A, Wagner M, Weigand H, Journel H, Keren B, Passemard S, Mignot C, van Gassen K, Brilstra EH, Itzikowitz G, O'Heir E, Allen J, Donald KA, Korf BR, Skelton T, Thompson M, Robin NH, Rudy NL, Dobyns WB, Foss K, Zarate YA, Bosanko KA, Alembik Y, Durand B, Tran Mau-Them F, Ranza E, Blanc X, Antonarakis SE, McWalter K, Torti E, Millan F, Dameron A, Tokita M, Zimmermann MT, Klee EW, Piton A, Gerard B) J Med Genet 2022 Oct;59(10):965-975 16 Citations |
2 | Protein primary structure correlates with calcium oxalate stone matrix preference. (Tian Y, Tirrell M, Davis C, Wesson JA) PLoS One 2021;16(9):e0257515 9 Citations |
1 | An Eight Amino Acid Segment Controls Oligomerization and Preferred Conformation of the two Non-visual Arrestins. (Chen Q, Zhuo Y, Sharma P, Perez I, Francis DJ, Chakravarthy S, Vishnivetskiy SA, Berndt S, Hanson SM, Zhan X, Brooks EK, Altenbach C, Hubbell WL, Klug CS, Iverson TM, Gurevich VV) J Mol Biol 2021 Feb 19;433(4):166790 18 Citations |
1 | Role of ultraviolet mutational signature versus tumor mutation burden in predicting response to immunotherapy. (Pham TV, Boichard A, Goodman A, Riviere P, Yeerna H, Tamayo P, Kurzrock R) Mol Oncol 2020 Aug;14(8):1680-1694 36 Citations |
1 | Structure-function guided modeling of chemokine-GPCR specificity for the chemokine XCL1 and its receptor XCR1. (Fox JC, Thomas MA, Dishman AF, Larsen O, Nakayama T, Yoshie O, Rosenkilde MM, Volkman BF) Sci Signal 2019 Sep 03;12(597) 17 Citations |
1 | Binding orientation and interaction of bile salt in its ternary complex with pancreatic lipase-colipase system. (Haque N, Prakash Prabhu N) Biochem Biophys Res Commun 2018 May 23;499(4):907-912 7 Citations |
1 | The membrane-distal regions of integrin α cytoplasmic domains contribute differently to integrin inside-out activation. (Thinn AMM, Wang Z, Zhu J) Sci Rep 2018 Mar 22;8(1):5067 9 Citations |
2 | Urinary Metabolites Associated with Blood Pressure on a Low- or High-Sodium Diet. (Cheng Y, Song H, Pan X, Xue H, Wan Y, Wang T, Tian Z, Hou E, Lanza IR, Liu P, Liu Y, Laud PW, Usa K, He Y, Liang M) Theranostics 2018;8(6):1468-1480 32 Citations |
1 | Protein Kinetics and Metabolic Effects Related to Disease States in the Intensive Care Unit. (Martindale RG, Heyland DK, Rugeles SJ, Wernerman J, Weijs PJ, Patel JJ, McClave SA) Nutr Clin Pract 2017 Apr;32(1_suppl):21S-29S 14 Citations |
1 | Targeting Stromal Glutamine Synthetase in Tumors Disrupts Tumor Microenvironment-Regulated Cancer Cell Growth. (Yang L, Achreja A, Yeung TL, Mangala LS, Jiang D, Han C, Baddour J, Marini JC, Ni J, Nakahara R, Wahlig S, Chiba L, Kim SH, Morse J, Pradeep S, Nagaraja AS, Haemmerle M, Kyunghee N, Derichsweiler M, Plackemeier T, Mercado-Uribe I, Lopez-Berestein G, Moss T, Ram PT, Liu J, Lu X, Mok SC, Sood AK, Nagrath D) Cell Metab 2016 Nov 08;24(5):685-700 330 Citations |
3 | S-SCAM, a rare copy number variation gene, induces schizophrenia-related endophenotypes in transgenic mouse model. (Zhang N, Zhong P, Shin SM, Metallo J, Danielson E, Olsen CM, Liu QS, Lee SH) J Neurosci 2015 Feb 04;35(5):1892-904 18 Citations |
1 | Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors. (Hopf TA, Morinaga S, Ihara S, Touhara K, Marks DS, Benton R) Nat Commun 2015 Jan 13;6:6077 99 Citations |
1 | PconsFold: improved contact predictions improve protein models. (Michel M, Hayat S, Skwark MJ, Sander C, Marks DS, Elofsson A) Bioinformatics 2014 Sep 01;30(17):i482-8 85 Citations |
2 | Real-time measurements of amino acid and protein hydroperoxides using coumarin boronic acid. (Michalski R, Zielonka J, Gapys E, Marcinek A, Joseph J, Kalyanaraman B) J Biol Chem 2014 Aug 08;289(32):22536-53 63 Citations |
1 | Deaminative and decarboxylative catalytic alkylation of amino acids with ketones. (Kalutharage N, Yi CS) Angew Chem Int Ed Engl 2013 Dec 16;52(51):13651-5 32 Citations |
1 | On the specificity of heparin/heparan sulfate binding to proteins. Anion-binding sites on antithrombin and thrombin are fundamentally different. (Mosier PD, Krishnasamy C, Kellogg GE, Desai UR) PLoS One 2012;7(11):e48632 50 Citations |
1 | Modulation of function of sodium-dependent vitamin C transporter 1 (SVCT1) by Rab8a in intestinal epithelial cells: studies utilizing Caco-2 cells and Rab8a knockout mice. (Subramanian VS, Subramanya SB, Ghosal A, Marchant JS, Harada A, Said HM) Dig Dis Sci 2013 Mar;58(3):641-9 10 Citations |
1 | A combined DPA1~DPB1 amino acid epitope is the primary unit of selection on the HLA-DP heterodimer. (Hollenbach JA, Madbouly A, Gragert L, Vierra-Green C, Flesch S, Spellman S, Begovich A, Noreen H, Trachtenberg E, Williams T, Yu N, Shaw B, Fleischhauer K, Fernandez-Vina M, Maiers M) Immunogenetics 2012 Aug;64(8):559-69 48 Citations |
1 | Free energies for coarse-grained proteins by integrating multibody statistical contact potentials with entropies from elastic network models. (Zimmermann MT, Leelananda SP, Gniewek P, Feng Y, Jernigan RL, Kloczkowski A) J Struct Funct Genomics 2011 Jul;12(2):137-47 17 Citations |
1 | Mesenchymal stem cells facilitate axon sorting, myelination, and functional recovery in paralyzed mice deficient in Schwann cell-derived laminin. (Carlson KB, Singh P, Feaster MM, Ramnarain A, Pavlides C, Chen ZL, Yu WM, Feltri ML, Strickland S) Glia 2011 Feb;59(2):267-77 48 Citations |
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1 | Multiple pocket recognition of SNAP25 by botulinum neurotoxin serotype E. (Chen S, Barbieri JT) J Biol Chem 2007 Aug 31;282(35):25540-7 42 Citations |
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