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1 | Insights into Dahl salt-sensitive hypertension revealed by temporal patterns of renal medullary gene expression. (Liang M, Yuan B, Rute E, Greene AS, Olivier M, Cowley AW Jr) Physiol Genomics 2003 Feb 06;12(3):229-37 54 Citations |
1 | Chemosensory regulation of developmental gene expression in Myxococcus xanthus. (Kirby JR, Zusman DR) Proc Natl Acad Sci U S A 2003 Feb 18;100(4):2008-13 92 Citations |
1 | Evolutionary changes in heat-inducible gene expression in lines of Escherichia coli adapted to high temperature. (Riehle MM, Bennett AF, Lenski RE, Long AD) Physiol Genomics 2003 Jun 24;14(1):47-58 72 Citations |
1 | Gene expression reveals vulnerability to oxidative stress and interstitial fibrosis of renal outer medulla to nonhypertensive elevations of ANG II. (Yuan B, Liang M, Yang Z, Rute E, Taylor N, Olivier M, Cowley AW Jr) Am J Physiol Regul Integr Comp Physiol 2003 May;284(5):R1219-30 26 Citations |
1 | DNA expression analysis: serial analysis of gene expression, microarrays and kidney disease. (Hayden PS, El-Meanawy A, Schelling JR, Sedor JR) Curr Opin Nephrol Hypertens 2003 Jul;12(4):407-14 15 Citations |
1 | Serial analysis of gene expression. (el-Meanawy MA, Barathan S, Hayden PS, Iyengar SK, Schelling JR, Sedor JR) Methods Mol Med 2003;86:257-74 3 Citations |
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1 | Analysis of differential gene expression in Echinococcus multilocularis larval stages by means of spliced leader differential display. (Brehm K, Wolf M, Beland H, Kroner A, Frosch M) Int J Parasitol 2003 Sep 30;33(11):1145-59 62 Citations |
1 | HPRT targeting: "Ets" a powerful tool for investigating endothelial-cell specific gene expression. (Ryan MJ, Sigmund CD) Arterioscler Thromb Vasc Biol 2003 Nov 01;23(11):1960-2 1 Citation |
1 | Difference in gene expression profiles between human CD4+CD25+ and CD4+CD25- T cells. (Pati N, Ghosh S, Hessner MJ, Khoo HJ, Wang X) Ann N Y Acad Sci 2003 Nov;1005:279-83 6 Citations |
1 | Adipose depot-specific modulation of angiotensinogen gene expression in diet-induced obesity. (Rahmouni K, Mark AL, Haynes WG, Sigmund CD) Am J Physiol Endocrinol Metab 2004 Jun;286(6):E891-5 97 Citations |
1 | [Muscarine receptor gene expression in brain and peripheral blood lymphocytes of rats pretreated with dimethoate for 28 days]. (Sun YG, Zhou ZJ, Zhang XM, Gu XA, Jin TY) Zhonghua Lao Dong Wei Sheng Zhi Ye Bing Za Zhi 2004 Feb;22(1):7-10 |
1 | Effect of high glucose on gene expression in mesangial cells: upregulation of the thiol pathway is an adaptational response. (Morrison J, Knoll K, Hessner MJ, Liang M) Physiol Genomics 2004 May 19;17(3):271-82 42 Citations |
2 | Gene expression profiling of potential PPARgamma target genes in mouse aorta. (Keen HL, Ryan MJ, Beyer A, Mathur S, Scheetz TE, Gackle BD, Faraci FM, Casavant TL, Sigmund CD) Physiol Genomics 2004 Jun 17;18(1):33-42 44 Citations |
1 | Inhibition of nitrosylation, nitration, lymphocyte proliferation, and gene expression in acute and delayed cardiac allograft rejection by an orally active dithiocarbamate. (Pieper GM, Khanna AK, Kampalath BN, Felix CC, Hilton G, Johnson CP, Adams MB, Roza AM) J Cardiovasc Pharmacol 2004 Apr;43(4):522-30 10 Citations |
1 | Glucose regulation of insulin gene expression requires the recruitment of p300 by the beta-cell-specific transcription factor Pdx-1. (Mosley AL, Corbett JA, Ozcan S) Mol Endocrinol 2004 Sep;18(9):2279-90 100 Citations |
1 | Cross-species global and subset gene expression profiling identifies genes involved in prostate cancer response to selenium. (Schlicht M, Matysiak B, Brodzeller T, Wen X, Liu H, Zhou G, Dhir R, Hessner MJ, Tonellato P, Suckow M, Pollard M, Datta MW) BMC Genomics 2004 Aug 20;5(1):58 27 Citations |
1 | Treatment with {alpha}-phenyl-N-tert-butylnitrone, a free radical-trapping agent, abrogates inflammatory cytokine gene expression during alloimmune activation in rat cardiac allografts. (Pieper GM, Nilakantan V, Zhou X, Khanna AK, Johnson CP, Roza AM, Adams MB, Hilton G, Felix CC) J Pharmacol Exp Ther 2005 Feb;312(2):774-9 6 Citations |
1 | Mechanisms of MAdCAM-1 gene expression in human intestinal microvascular endothelial cells. (Ogawa H, Binion DG, Heidemann J, Theriot M, Fisher PJ, Johnson NA, Otterson MF, Rafiee P) Am J Physiol Cell Physiol 2005 Feb;288(2):C272-81 49 Citations |
1 | Chinchilla middle ear epithelial mucin gene expression in response to inflammatory cytokines. (Kerschner JE, Meyer TK, Burrows A) Arch Otolaryngol Head Neck Surg 2004 Oct;130(10):1163-7 26 Citations |
3 | Targeting platelet GPIbalpha transgene expression to human megakaryocytes and forming a complete complex with endogenous GPIbbeta and GPIX. (Shi Q, Wilcox DA, Morateck PA, Fahs SA, Kenny D, Montgomery RR) J Thromb Haemost 2004 Nov;2(11):1989-97 33 Citations |
1 | Identification of persistently altered gene expression in the kidney after functional recovery from ischemic acute renal failure. (Basile DP, Fredrich K, Alausa M, Vio CP, Liang M, Rieder MR, Greene AS, Cowley AW Jr) Am J Physiol Renal Physiol 2005 May;288(5):F953-63 86 Citations |
1 | Changes in gene expression within the nucleus accumbens and striatum following sexual experience. (Bradley KC, Boulware MB, Jiang H, Doerge RW, Meisel RL, Mermelstein PG) Genes Brain Behav 2005 Feb;4(1):31-44 31 Citations |
1 | Hierarchical change in antioxidant enzyme gene expression and activity in acute cardiac rejection: role of inducible nitric oxide synthase. (Nilakantan V, Zhou X, Hilton G, Roza AM, Adams MB, Johnson CP, Pieper GM) Mol Cell Biochem 2005 Feb;270(1-2):39-47 14 Citations |
1 | Partial rescue of neonatal lethality of Dhcr7 null mice by a nestin promoter-driven DHCR7 transgene expression. (Yu H, Wessels A, Tint GS, Patel SB) Brain Res Dev Brain Res 2005 Apr 21;156(1):46-60 15 Citations |
1 | Changes in gene expression following high-temperature adaptation in experimentally evolved populations of E. coli. (Riehle MM, Bennett AF, Long AD) Physiol Biochem Zool 2005;78(3):299-315 20 Citations |
1 | Differential Patterns of Gene Expression and Gene Complement in Laboratory-Evolved Lines of E. coli. (Riehle MM, Bennett AF, Long AD) Integr Comp Biol 2005 Jun;45(3):532-8 10 Citations |
1 | SRF-dependent gene expression in isolated cardiomyocytes: regulation of genes involved in cardiac hypertrophy. (Nelson TJ, Balza R Jr, Xiao Q, Misra RP) J Mol Cell Cardiol 2005 Sep;39(3):479-89 80 Citations |
1 | Long-term therapy with the acorn cardiac support device normalizes gene expression of growth factors and gelatinases in dogs with heart failure. (Rastogi S, Gupta RC, Mishra S, Morita H, Tanhehco EJ, Sabbah HN) J Heart Lung Transplant 2005 Oct;24(10):1619-25 22 Citations |
1 | Differentiation of murine embryonic stem cells induces progesterone receptor gene expression. (Sauter CN, McDermid RL, Weinberg AL, Greco TL, Xu X, Murdoch FE, Fritsch MK) Exp Cell Res 2005 Dec 10;311(2):251-64 29 Citations |
1 | A CFD-based method to evaluate the effect of shear stress on endothelial gene expression in vivo (Himburg HA, Lamack JA, Friedman MH) Proceedings of the 2005 Summer Bioengineering Conference 2005;2005:1392-1393 |
1 | Role of the serum response factor in regulating contractile apparatus gene expression and sarcomeric integrity in cardiomyocytes. (Balza RO Jr, Misra RP) J Biol Chem 2006 Mar 10;281(10):6498-510 84 Citations |
1 | Quantitative quality control of microarray experiments: Toward accurate gene expression measurements (Wang X, Hessner MJ) Gene Expression Profiling by Microarrays: Clinical Implications 1 January 2006:27-46 2 Citations |
1 | Three-color cDNA microarrays with prehybridization quality control yield gene expression data comparable to that of commercial platforms. (Hessner MJ, Xiang B, Jia S, Geoffrey R, Holmes S, Meyer L, Muheisen S, Wang X) Physiol Genomics 2006 Mar 13;25(1):166-78 5 Citations |
1 | Gene expression patterns in advanced human cervical cancer. (Grigsby PW, Watson M, Powell MA, Zhang Z, Rader JS) Int J Gynecol Cancer 2006;16(2):562-7 27 Citations |
1 | Conditional gene expression in the mouse using a Sleeping Beauty gene-trap transposon. (Geurts AM, Wilber A, Carlson CM, Lobitz PD, Clark KJ, Hackett PB, McIvor RS, Largaespada DA) BMC Biotechnol 2006 Jun 26;6:30 35 Citations |
1 | Comprehensive quality control utilizing the prehybridization third-dye image leads to accurate gene expression measurements by cDNA microarrays. (Wang X, Jia S, Meyer L, Xiang B, Chen LY, Jiang N, Moreno C, Jacob HJ, Ghosh S, Hessner MJ) BMC Bioinformatics 2006 Aug 14;7:378 8 Citations |
1 | Interleukin-1beta attenuates renin gene expression via a mitogen-activated protein kinase kinase-extracellular signal-regulated kinase and signal transducer and activator of transcription 3-dependent mechanism in As4.1 cells. (Liu X, Shi Q, Sigmund CD) Endocrinology 2006 Dec;147(12):6011-8 23 Citations |
1 | Acquisition of accurate gene expression information from microarray measurements (Jia S, Gao S, Hessner MJ, Wang X) Current Topics in Human Genetics: Studies in Complex Diseases 1 January 2007:351-364 |
1 | Microarray and real-time PCR analysis of adrenal gland gene expression in the 7-day-old rat: effects of hypoxia from birth. (Bruder ED, Lee JJ, Widmaier EP, Raff H) Physiol Genomics 2007 Apr 24;29(2):193-200 17 Citations |
1 | Gene expression analysis of gallium-resistant and gallium-sensitive lymphoma cells reveals a role for metal-responsive transcription factor-1, metallothionein-2A, and zinc transporter-1 in modulating the antineoplastic activity of gallium nitrate. (Yang M, Kroft SH, Chitambar CR) Mol Cancer Ther 2007 Feb;6(2):633-43 35 Citations |
1 | Regulation of TGF-beta1/MAPK-mediated PAI-1 gene expression by the actin cytoskeleton in human mesangial cells. (Yang C, Patel K, Harding P, Sorokin A, Glass WF 2nd) Exp Cell Res 2007 Apr 01;313(6):1240-50 39 Citations |
1 | Potassium channel gene expression in the rat cochlear nucleus. (Friedland DR, Eernisse R, Popper P) Hear Res 2007 Jun;228(1-2):31-43 16 Citations |
1 | Recombinant adeno-associated virus targets passenger gene expression to cones in primate retina. (Mancuso K, Hendrickson AE, Connor TB Jr, Mauck MC, Kinsella JJ, Hauswirth WW, Neitz J, Neitz M) J Opt Soc Am A Opt Image Sci Vis 2007 May;24(5):1411-6 27 Citations |
1 | A transgenic mouse model of plasma cell malignancy shows phenotypic, cytogenetic, and gene expression heterogeneity similar to human multiple myeloma. (Boylan KL, Gosse MA, Staggs SE, Janz S, Grindle S, Kansas GS, Van Ness BG) Cancer Res 2007 May 01;67(9):4069-78 36 Citations |
1 | A common polymorphism in the bile acid receptor farnesoid X receptor is associated with decreased hepatic target gene expression. (Marzolini C, Tirona RG, Gervasini G, Poonkuzhali B, Assem M, Lee W, Leake BF, Schuetz JD, Schuetz EG, Kim RB) Mol Endocrinol 2007 Aug;21(8):1769-80 60 Citations |
2 | Distinct profiles of endothelial gene expression in hyperpermeable regions of the porcine aortic arch and thoracic aorta. (LaMack JA, Himburg HA, Friedman MH) Atherosclerosis 2007 Dec;195(2):e35-41 11 Citations |
1 | Mucin gene expression in human middle ear epithelium. (Kerschner JE) Laryngoscope 2007 Sep;117(9):1666-76 70 Citations |
1 | Gene expression profiling reveals different pathways related to Abl and other genes that cooperate with c-Myc in a model of plasma cell neoplasia. (Park ES, Shaughnessy JD Jr, Gupta S, Wang H, Lee JS, Woo HG, Zhan F, Owens JD Jr, Potter M, Janz S, Mushinski JF) BMC Genomics 2007 Aug 31;8:302 19 Citations |
1 | Individual and combined effects of shear stress magnitude and spatial gradient on endothelial cell gene expression. (LaMack JA, Friedman MH) Am J Physiol Heart Circ Physiol 2007 Nov;293(5):H2853-9 53 Citations |
1 | Gene expression analysis of zebrafish retinal ganglion cells during optic nerve regeneration identifies KLF6a and KLF7a as important regulators of axon regeneration. (Veldman MB, Bemben MA, Thompson RC, Goldman D) Dev Biol 2007 Dec 15;312(2):596-612 129 Citations |
1 | Expression pattern for unc5b, an axon guidance gene in embryonic zebrafish development (Gene Expression 13, 6, (321-327)) (Kaur S, Abu-Asab MS, Singla S, Yeo SY, Ramchandran R) Gene Expression 2007;14(2):129 |
1 | Aging alters gene expression of growth and remodeling factors in human skeletal muscle both at rest and in response to acute resistance exercise. (Dennis RA, Przybyla B, Gurley C, Kortebein PM, Simpson P, Sullivan DH, Peterson CA) Physiol Genomics 2008 Feb 19;32(3):393-400 83 Citations |
1 | Novel CYP2C9 promoter variants and assessment of their impact on gene expression. (Kramer MA, Rettie AE, Rieder MJ, Cabacungan ET, Hines RN) Mol Pharmacol 2008 Jun;73(6):1751-60 31 Citations |
1 | Gene expression signatures of radiation response are specific, durable and accurate in mice and humans. (Meadows SK, Dressman HK, Muramoto GG, Himburg H, Salter A, Wei Z, Ginsburg GS, Chao NJ, Nevins JR, Chute JP) PLoS One 2008 Apr 02;3(4):e1912 97 Citations |
1 | Regulatory polymorphism in vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement. (Wang D, Chen H, Momary KM, Cavallari LH, Johnson JA, Sadée W) Blood 2008 Aug 15;112(4):1013-21 180 Citations |
1 | Apoptosis induction and attenuation of inflammatory gene expression in murine macrophages via multitherapeutic nanomembranes (Pierstorff E, Krucoff M, Ho D) Nanotechnology 2 July 2008;19(26) 4 Citations |
1 | Apoptosis induction and attenuation of inflammatory gene expression in murine macrophages via multitherapeutic nanomembranes. (Pierstorff E, Krucoff M, Ho D) Nanotechnology 2008 Jul 02;19(26):265103 4 Citations |
1 | 3.6 kb genomic sequence from Takifugu capable of promoting axon growth-associated gene expression in developing and regenerating zebrafish neurons. (Udvadia AJ) Gene Expr Patterns 2008 Jul;8(6):382-388 34 Citations |
2 | Cidofovir modulated gene expression in recurrent respiratory papillomatosis. (Poetker DM, Patel NJ, Kerschner JE) Int J Pediatr Otorhinolaryngol 2008 Sep;72(9):1385-92 5 Citations |
3 | Mucin gene expression in human laryngeal epithelia: effect of laryngopharyngeal reflux. (Samuels TL, Handler E, Syring ML, Pajewski NM, Blumin JH, Kerschner JE, Johnston N) Ann Otol Rhinol Laryngol 2008 Sep;117(9):688-95 57 Citations |
1 | The effects of acute 17beta-estradiol treatment on gene expression in the young female mouse hippocampus. (Pechenino AS, Frick KM) Neurobiol Learn Mem 2009 Mar;91(3):315-22 32 Citations |
1 | Use of staurosporine, an actin-modifying agent, to enhance fibrochondrocyte matrix gene expression and synthesis. (Hoben GM, Athanasiou KA) Cell Tissue Res 2008 Dec;334(3):469-76 15 Citations |
1 | Quality Weighted Mean and T-test in Microarray Analysis Lead to Improved Accuracy in Gene Expression Measurements and Reduced Type I and II Errors in Differential Expression Detection. (Gao S, Jia S, Hessner M, Wang X) J Comput Sci Syst Biol 2008 Dec 26;1:41 |
1 | Gene expression differences in infected and noninfected middle ear complementary DNA libraries. (Kerschner JE, Horsey E, Ahmed A, Erbe C, Khampang P, Cioffi J, Hu FZ, Post JC, Ehrlich GD) Arch Otolaryngol Head Neck Surg 2009 Jan;135(1):33-9 12 Citations |
1 | Exploring differential gene expression in zebrafish to teach basic molecular biology skills. (Schmoldt A, Forecki J, Hammond DR, Udvadia AJ) Zebrafish 2009 Jun;6(2):187-99 4 Citations |
1 | Sustained high-level polyclonal hematopoietic marking and transgene expression 4 years after autologous transplantation of rhesus macaques with SIV lentiviral vector-transduced CD34+ cells. (Kim YJ, Kim YS, Larochelle A, Renaud G, Wolfsberg TG, Adler R, Donahue RE, Hematti P, Hong BK, Roayaei J, Akagi K, Riberdy JM, Nienhuis AW, Dunbar CE, Persons DA) Blood 2009 May 28;113(22):5434-43 41 Citations |
1 | Regulation of renin gene expression by oxidative stress. (Itani H, Liu X, Sarsour EH, Goswami PC, Born E, Keen HL, Sigmund CD) Hypertension 2009 Jun;53(6):1070-6 19 Citations |
1 | Structure and function of regulatory RNA elements: ribozymes that regulate gene expression. (Scott WG, Martick M, Chi YI) Biochim Biophys Acta 2009;1789(9-10):634-41 28 Citations |
1 | Febrile-range temperature modifies cytokine gene expression in LPS-stimulated macrophages by differentially modifying NF-{kappa}B recruitment to cytokine gene promoters. (Cooper ZA, Ghosh A, Gupta A, Maity T, Benjamin IJ, Vogel SN, Hasday JD, Singh IS) Am J Physiol Cell Physiol 2010 Jan;298(1):C171-81 34 Citations |
1 | Tuba1a gene expression is regulated by KLF6/7 and is necessary for CNS development and regeneration in zebrafish. (Veldman MB, Bemben MA, Goldman D) Mol Cell Neurosci 2010 Apr;43(4):370-83 49 Citations |
1 | Emerging regulatory paradigms for control of gene expression by 1,25-dihydroxyvitamin D3. (Pike JW, Meyer MB, Martowicz ML, Bishop KA, Lee SM, Nerenz RD, Goetsch PD) J Steroid Biochem Mol Biol 2010 Jul;121(1-2):130-5 49 Citations |
2 | Endothelial gene expression in regions of defined shear exposure in the porcine iliac arteries. (LaMack JA, Himburg HA, Zhang J, Friedman MH) Ann Biomed Eng 2010 Jul;38(7):2252-62 9 Citations |
1 | An improved one-tube RT-PCR protocol for analyzing single-cell gene expression in individual mammalian cells. (Li Y, Thompson H, Hemphill C, Hong F, Forrester J, Johnson RH, Zhang W, Meldrum DR) Anal Bioanal Chem 2010 Jul;397(5):1853-9 17 Citations |
1 | Diagnosis of partial body radiation exposure in mice using peripheral blood gene expression profiles. (Meadows SK, Dressman HK, Daher P, Himburg H, Russell JL, Doan P, Chao NJ, Lucas J, Nevins JR, Chute JP) PLoS One 2010 Jul 12;5(7):e11535 48 Citations |
1 | Mucin gene expression and mouse middle ear epithelium. (Kerschner JE, Li J, Tsushiya K, Khampang P) Int J Pediatr Otorhinolaryngol 2010 Aug;74(8):864-8 14 Citations |
1 | Global analysis of phase locking in gene expression during cell cycle: the potential in network modeling. (Gao S, Hartman JL 4th, Carter JL, Hessner MJ, Wang X) BMC Syst Biol 2010 Dec 03;4:167 8 Citations |
1 | A gene expression signature from human breast cancer cells with acquired hormone independence identifies MYC as a mediator of antiestrogen resistance. (Miller TW, Balko JM, Ghazoui Z, Dunbier A, Anderson H, Dowsett M, González-Angulo AM, Mills GB, Miller WR, Wu H, Shyr Y, Arteaga CL) Clin Cancer Res 2011 Apr 01;17(7):2024-34 81 Citations |
1 | The Borrelia burgdorferi integrin ligand P66 affects gene expression by human cells in culture. (LaFrance ME, Pierce JV, Antonara S, Coburn J) Infect Immun 2011 Aug;79(8):3249-61 16 Citations |
1 | Quantitative single-cell gene expression measurements of multiple genes in response to hypoxia treatment. (Zeng J, Wang J, Gao W, Mohammadreza A, Kelbauskas L, Zhang W, Johnson RH, Meldrum DR) Anal Bioanal Chem 2011 Jul;401(1):3-13 11 Citations |
2 | Sox factors transcriptionally regulate ROBO4 gene expression in developing vasculature in zebrafish. (Samant GV, Schupp MO, François M, Moleri S, Kothinti RK, Chun CZ, Sinha I, Sellars S, Leigh N, Pramanik K, Horswill MA, Remadevi I, Li K, Wilkinson GA, Tabatabai NM, Beltrame M, Koopman P, Ramchandran R) J Biol Chem 2011 Sep 02;286(35):30740-30747 14 Citations |
1 | Quantification of gene expression after painful nerve injury: validation of optimal reference genes. (Bangaru ML, Park F, Hudmon A, McCallum JB, Hogan QH) J Mol Neurosci 2012 Mar;46(3):497-504 36 Citations |
1 | BB rat Gimap gene expression in sorted lymphoid T and B cells. (Moralejo DH, Fuller JM, Rutledge EA, Van Yserloo B, Ettinger RA, Jensen R, Osborne W, Kwitek A, Lernmark A) Life Sci 2011 Nov 07;89(19-20):748-54 8 Citations |
2 | Gammaherpesvirus gene expression and DNA synthesis are facilitated by viral protein kinase and histone variant H2AX. (Mounce BC, Tsan FC, Droit L, Kohler S, Reitsma JM, Cirillo LA, Tarakanova VL) Virology 2011 Nov 25;420(2):73-81 18 Citations |
1 | Efficient non-viral integration and stable gene expression in multipotent adult progenitor cells. (Wilber A, Ulloa Montoya F, Hammer L, Moriarity BS, Geurts AM, Largaespada DA, Verfaillie CM, McIvor RS, Lakshmipathy U) Stem Cells Int 2011;2011:717069 7 Citations |
1 | Ccr5 regulates inflammatory gene expression in response to encephalomyocarditis virus infection. (Christmann BS, Moran JM, McGraw JA, Buller RM, Corbett JA) Am J Pathol 2011 Dec;179(6):2941-51 12 Citations |
1 | Global gene expression profiling in mouse plasma cell tumor precursor and bystander cells reveals potential intervention targets for plasma cell neoplasia. (LeGrand J, Park ES, Wang H, Gupta S, Owens JD Jr, Nelson PJ, DuBois W, Bair T, Janz S, Mushinski JF) Blood 2012 Jan 26;119(4):1018-28 5 Citations |
1 | Pathway-specific analysis of gene expression data identifies the PI3K/Akt pathway as a novel therapeutic target in cervical cancer. (Schwarz JK, Payton JE, Rashmi R, Xiang T, Jia Y, Huettner P, Rogers BE, Yang Q, Watson M, Rader JS, Grigsby PW) Clin Cancer Res 2012 Mar 01;18(5):1464-71 93 Citations |
1 | Myocardial alternative RNA splicing and gene expression profiling in early stage hypoplastic left heart syndrome. (Ricci M, Xu Y, Hammond HL, Willoughby DA, Nathanson L, Rodriguez MM, Vatta M, Lipshultz SE, Lincoln J) PLoS One 2012;7(1):e29784 24 Citations |
1 | Epigenetic reprogramming reverses the relapse-specific gene expression signature and restores chemosensitivity in childhood B-lymphoblastic leukemia. (Bhatla T, Wang J, Morrison DJ, Raetz EA, Burke MJ, Brown P, Carroll WL) Blood 2012 May 31;119(22):5201-10 117 Citations |
1 | GB virus type C infection polarizes T-cell cytokine gene expression toward a Th1 cytokine profile via NS5A protein expression. (Rydze RT, Xiang J, McLinden JH, Stapleton JT) J Infect Dis 2012 Jul 01;206(1):69-72 13 Citations |
1 | Shutoff of BZLF1 gene expression is necessary for immortalization of primary B cells by Epstein-Barr virus. (Yu X, McCarthy PJ, Wang Z, Gorlen DA, Mertz JE) J Virol 2012 Aug;86(15):8086-96 16 Citations |
1 | Geminin is required for zygotic gene expression at the Xenopus mid-blastula transition. (Kerns SL, Schultz KM, Barry KA, Thorne TM, McGarry TJ) PLoS One 2012;7(5):e38009 14 Citations |
1 | Integrative analysis of single nucleotide polymorphisms and gene expression efficiently distinguishes samples from closely related ethnic populations. (Yang HC, Wang PL, Lin CW, Chen CH, Chen CH) BMC Genomics 2012 Jul 28;13:346 10 Citations |
2 | Transposon-mediated transgenesis, transgenic rescue, and tissue-specific gene expression in rodents and rabbits. (Katter K, Geurts AM, Hoffmann O, Mátés L, Landa V, Hiripi L, Moreno C, Lazar J, Bashir S, Zidek V, Popova E, Jerchow B, Becker K, Devaraj A, Walter I, Grzybowksi M, Corbett M, Filho AR, Hodges MR, Bader M, Ivics Z, Jacob HJ, Pravenec M, Bosze Z, Rülicke T, Izsvák Z) FASEB J 2013 Mar;27(3):930-41 79 Citations |
2 | Modulation of B-cell tolerance by murine gammaherpesvirus 68 infection: requirement for Orf73 viral gene expression and follicular helper T cells. (Gauld SB, De Santis JL, Kulinski JM, McGraw JA, Leonardo SM, Ruder EA, Maier W, Tarakanova VL) Immunology 2013 Jun;139(2):197-204 15 Citations |
1 | Gene expression-based classifiers identify Staphylococcus aureus infection in mice and humans. (Ahn SH, Tsalik EL, Cyr DD, Zhang Y, van Velkinburgh JC, Langley RJ, Glickman SW, Cairns CB, Zaas AK, Rivers EP, Otero RM, Veldman T, Kingsmore SF, Lucas J, Woods CW, Ginsburg GS, Fowler VG Jr) PLoS One 2013;8(1):e48979 42 Citations |
1 | RAS/MEK-independent gene expression reveals BMP2-related malignant phenotypes in the Nf1-deficient MPNST. (Sun D, Haddad R, Kraniak JM, Horne SD, Tainsky MA) Mol Cancer Res 2013 Jun;11(6):616-27 11 Citations |
3 | Functional characterization of EZH2β reveals the increased complexity of EZH2 isoforms involved in the regulation of mammalian gene expression. (Grzenda A, Lomberk G, Svingen P, Mathison A, Calvo E, Iovanna J, Xiong Y, Faubion W, Urrutia R) Epigenetics Chromatin 2013 Feb 28;6(1):3 25 Citations |
1 | Differential gene expression associated with dietary methylmercury (MeHg) exposure in rainbow trout (Oncorhynchus mykiss) and zebrafish (Danio rerio). (Liu Q, Basu N, Goetz G, Jiang N, Hutz RJ, Tonellato PJ, Carvan MJ 3rd) Ecotoxicology 2013 May;22(4):740-51 22 Citations |
1 | Murine cytomegalovirus immediate-early 1 gene expression correlates with increased GVHD after allogeneic hematopoietic cell transplantation in recipients reactivating from latent infection. (Palaniyandi S, Radhakrishnan SV, Karlsson FJ, Stokes KY, Kittan N, Huber E, Hildebrandt GC) PLoS One 2013;8(4):e61841 11 Citations |
1 | A comprehensive analysis of adiponectin QTLs using SNP association, SNP cis-effects on peripheral blood gene expression and gene expression correlation identified novel metabolic syndrome (MetS) genes with potential role in carcinogenesis and systemic inflammation. (Zhang Y, Kent JW Jr, Olivier M, Ali O, Cerjak D, Broeckel U, Abdou RM, Dyer TD, Comuzzie A, Curran JE, Carless MA, Rainwater DL, Göring HH, Blangero J, Kissebah AH) BMC Med Genomics 2013 Apr 29;6:14 23 Citations |
1 | Genome-wide expression analysis and EMX2 gene expression in embryonic myoblasts committed to diverse skeletal muscle fiber type fates. (Weimer K, Theobald J, Campbell KS, Esser KA, DiMario JX) Dev Dyn 2013 Aug;242(8):1001-20 5 Citations |
2 | Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance. (Okamoto M, Peterson FC, Defries A, Park SY, Endo A, Nambara E, Volkman BF, Cutler SR) Proc Natl Acad Sci U S A 2013 Jul 16;110(29):12132-7 232 Citations |
1 | No impact of lentiviral transduction on hematopoietic stem/progenitor cell telomere length or gene expression in the rhesus macaque model. (Sellers SE, Dumitriu B, Morgan MJ, Hughes WM, Wu CO, Raghavarchari N, Yang Y, Uchida N, Tisdale JF, An DS, Chen IS, Hematti P, Donahue RE, Larochelle A, Young NS, Calado RT, Dunbar CE) Mol Ther 2014 Jan;22(1):52-8 4 Citations |
1 | Gene expression and pathologic alterations in juvenile rainbow trout due to chronic dietary TCDD exposure. (Liu Q, Rise ML, Spitsbergen JM, Hori TS, Mieritz M, Geis S, McGraw JE, Goetz G, Larson J, Hutz RJ, Carvan MJ 3rd) Aquat Toxicol 2013 Sep 15;140-141:356-68 19 Citations |
1 | Identification of candidate B-lymphoma genes by cross-species gene expression profiling. (Tompkins VS, Han SS, Olivier A, Syrbu S, Bair T, Button A, Jacobus L, Wang Z, Lifton S, Raychaudhuri P, Morse HC 3rd, Weiner G, Link B, Smith BJ, Janz S) PLoS One 2013;8(10):e76889 11 Citations |
2 | High-level transgene expression in induced pluripotent stem cell-derived megakaryocytes: correction of Glanzmann thrombasthenia. (Sullivan SK, Mills JA, Koukouritaki SB, Vo KK, Lyde RB, Paluru P, Zhao G, Zhai L, Sullivan LM, Wang Y, Kishore S, Gharaibeh EZ, Lambert MP, Wilcox DA, French DL, Poncz M, Gadue P) Blood 2014 Jan 30;123(5):753-7 47 Citations |
1 | Three-tiered role of the pioneer factor GATA2 in promoting androgen-dependent gene expression in prostate cancer. (Wu D, Sunkel B, Chen Z, Liu X, Ye Z, Li Q, Grenade C, Ke J, Zhang C, Chen H, Nephew KP, Huang TH, Liu Z, Jin VX, Wang Q) Nucleic Acids Res 2014 Apr;42(6):3607-22 100 Citations |
1 | Angiotensin II-induced cardiovascular load regulates cardiac remodeling and related gene expression in late-gestation fetal sheep. (Norris AW, Bahr TM, Scholz TD, Peterson ES, Volk KA, Segar JL) Pediatr Res 2014 Jun;75(6):689-696 9 Citations |
1 | Histopathologic alterations associated with global gene expression due to chronic dietary TCDD exposure in juvenile zebrafish. (Liu Q, Spitsbergen JM, Cariou R, Huang CY, Jiang N, Goetz G, Hutz RJ, Tonellato PJ, Carvan MJ 3rd) PLoS One 2014;9(7):e100910 16 Citations |
2 | Viral oncogene expression in the stem/progenitor cell compartment of the mouse intestine induces adenomatous polyps. (Sáenz Robles MT, Chong JL, Koivisto C, Trimboli A, Liu H, Leone G, Pipas JM) Mol Cancer Res 2014 Oct;12(10):1355-64 3 Citations |
1 | Renin knockout rat: control of adrenal aldosterone and corticosterone synthesis in vitro and adrenal gene expression. (Raff H, Gehrand A, Bruder ED, Hoffman MJ, Engeland WC, Moreno C) Am J Physiol Regul Integr Comp Physiol 2015 Jan 01;308(1):R73-7 6 Citations |
1 | AF10 regulates progressive H3K79 methylation and HOX gene expression in diverse AML subtypes. (Deshpande AJ, Deshpande A, Sinha AU, Chen L, Chang J, Cihan A, Fazio M, Chen CW, Zhu N, Koche R, Dzhekieva L, Ibáñez G, Dias S, Banka D, Krivtsov A, Luo M, Roeder RG, Bradner JE, Bernt KM, Armstrong SA) Cancer Cell 2014 Dec 08;26(6):896-908 133 Citations |
1 | Prenatal stress induces spatial memory deficits and epigenetic changes in the hippocampus indicative of heterochromatin formation and reduced gene expression. (Benoit JD, Rakic P, Frick KM) Behav Brain Res 2015 Mar 15;281:1-8 78 Citations |
1 | DOT1L inhibits SIRT1-mediated epigenetic silencing to maintain leukemic gene expression in MLL-rearranged leukemia. (Chen CW, Koche RP, Sinha AU, Deshpande AJ, Zhu N, Eng R, Doench JG, Xu H, Chu SH, Qi J, Wang X, Delaney C, Bernt KM, Root DE, Hahn WC, Bradner JE, Armstrong SA) Nat Med 2015 Apr;21(4):335-43 175 Citations |
1 | Gene expression. MicroRNA control of protein expression noise. (Schmiedel JM, Klemm SL, Zheng Y, Sahay A, Blüthgen N, Marks DS, van Oudenaarden A) Science 2015 Apr 03;348(6230):128-32 288 Citations |
1 | Parallel Gene Expression Changes in Sarcoidosis Involving the Lacrimal Gland, Orbital Tissue, or Blood. (Rosenbaum JT, Choi D, Wilson DJ, Grossniklaus HE, Harrington CA, Sibley CH, Dailey RA, Ng JD, Steele EA, Czyz CN, Foster JA, Tse D, Alabiad C, Dubovy S, Parekh P, Harris GJ, Kazim M, Patel P, White V, Dolman P, Korn BS, Kikkawa D, Edward DP, Alkatan H, Al-Hussain H, Yeatts RP, Selva D, Stauffer P, Planck SR) JAMA Ophthalmol 2015 Jul;133(7):770-7 25 Citations |
1 | Hypermethylation of BDNF and SST Genes in the Orbital Frontal Cortex of Older Individuals: A Putative Mechanism for Declining Gene Expression with Age. (McKinney BC, Lin CW, Oh H, Tseng GC, Lewis DA, Sibille E) Neuropsychopharmacology 2015 Oct;40(11):2604-13 22 Citations |
4 | The Aurora A-HP1γ pathway regulates gene expression and mitosis in cells from the sperm lineage. (Leonard PH, Grzenda A, Mathison A, Morbeck DE, Fredrickson JR, de Assuncao TM, Christensen T, Salisbury J, Calvo E, Iovanna J, Coddington CC, Urrutia R, Lomberk G) BMC Dev Biol 2015 May 29;15:23 6 Citations |
1 | Fibrosis, gene expression and orbital inflammatory disease. (Rosenbaum JT, Choi D, Wilson DJ, Grossniklaus HE, Harrington CA, Dailey RA, Ng JD, Steele EA, Czyz CN, Foster JA, Tse D, Alabiad C, Dubovy S, Parekh P, Harris GJ, Kazim M, Patel P, White V, Dolman P, Edward DP, Alkatan H, Al Hussain H, Selva D, Yeatts P, Korn B, Kikkawa D, Stauffer P, Planck SR) Br J Ophthalmol 2015 Oct;99(10):1424-9 27 Citations |
1 | Orbital pseudotumor can be a localized form of granulomatosis with polyangiitis as revealed by gene expression profiling. (Rosenbaum JT, Choi D, Wilson DJ, Grossniklaus HE, Harrington CA, Sibley CH, Dailey RA, Ng JD, Steele EA, Czyz CN, Foster JA, Tse D, Alabiad C, Dubovy S, Parekh PK, Harris GJ, Kazim M, Patel PJ, White VA, Dolman PJ, Korn BS, Kikkawa DO, Edward DP, Alkatan HM, al-Hussain H, Yeatts RP, Selva D, Stauffer P, Planck SR) Exp Mol Pathol 2015 Oct;99(2):271-8 27 Citations |
5 | Gene Expression in Experimental Aortic Coarctation and Repair: Candidate Genes for Therapeutic Intervention? (LaDisa JF Jr, Bozdag S, Olson J, Ramchandran R, Kersten JR, Eddinger TJ) PLoS One 2015;10(7):e0133356 6 Citations |
4 | Low Socioeconomic Status, Adverse Gene Expression Profiles, and Clinical Outcomes in Hematopoietic Stem Cell Transplant Recipients. (Knight JM, Rizzo JD, Logan BR, Wang T, Arevalo JM, Ma J, Cole SW) Clin Cancer Res 2016 Jan 01;22(1):69-78 62 Citations |
2 | Comparing gene expression data from formalin-fixed, paraffin embedded tissues and qPCR with that from snap-frozen tissue and microarrays for modeling outcomes of patients with ovarian carcinoma. (Bradley WH, Eng K, Le M, Mackinnon AC, Kendziorski C, Rader JS) BMC Clin Pathol 2015;15:17 7 Citations |
1 | FRAS1-related extracellular matrix 3 (FREM3) single-nucleotide polymorphism effects on gene expression, amygdala reactivity and perceptual processing speed: An accelerated aging pathway of depression risk. (Nikolova YS, Iruku SP, Lin CW, Conley ED, Puralewski R, French B, Hariri AR, Sibille E) Front Psychol 2015;6:1377 12 Citations |
1 | Dexamethasone modulation of MUC5AC and MUC2 gene expression in a generalized model of middle ear inflammation. (Kerschner JE, Khampang P, Hong W) Laryngoscope 2016 Jul;126(7):E248-54 1 Citation |
1 | Gene expression and immunochemical localization of major cytochrome P450 drug-metabolizing enzymes in bovine nasal olfactory and respiratory mucosa. (Dhamankar V, Assem M, Donovan MD) Inhal Toxicol 2015;27(14):767-77 7 Citations |
2 | Comprehensive evaluation of AmpliSeq transcriptome, a novel targeted whole transcriptome RNA sequencing methodology for global gene expression analysis. (Li W, Turner A, Aggarwal P, Matter A, Storvick E, Arnett DK, Broeckel U) BMC Genomics 2015 Dec 16;16:1069 67 Citations |
1 | Host gene expression classifiers diagnose acute respiratory illness etiology. (Tsalik EL, Henao R, Nichols M, Burke T, Ko ER, McClain MT, Hudson LL, Mazur A, Freeman DH, Veldman T, Langley RJ, Quackenbush EB, Glickman SW, Cairns CB, Jaehne AK, Rivers EP, Otero RM, Zaas AK, Kingsmore SF, Lucas J, Fowler VG Jr, Carin L, Ginsburg GS, Woods CW) Sci Transl Med 2016 Jan 20;8(322):322ra11 172 Citations |
1 | System-Wide Associations between DNA-Methylation, Gene Expression, and Humoral Immune Response to Influenza Vaccination. (Zimmermann MT, Oberg AL, Grill DE, Ovsyannikova IG, Haralambieva IH, Kennedy RB, Poland GA) PLoS One 2016;11(3):e0152034 40 Citations |
2 | Raphe gene expression changes implicate immune-related functions in ventilatory plasticity following carotid body denervation in rats. (Mouradian GC Jr, Liu P, Hodges MR) Exp Neurol 2017 Jan;287(Pt 2):102-112 5 Citations |
1 | A two-stage approach for combining gene expression and mutation with clinical data improves survival prediction in myelodysplastic syndromes and ovarian cancer. (Li Y, Zhang X, Akinyemiju T, Ojesina AI, Szychowski JM, Liu N, Xu B, Yi N) J Bioinform Genom 2016 Sep;1(1) |
1 | Application of RNAi-induced gene expression profiles for prognostic prediction in breast cancer. (Wang Y, Mark KM, Ung MH, Kettenbach A, Miller T, Xu W, Cheng W, Xia T, Cheng C) Genome Med 2016 Oct 27;8(1):114 2 Citations |
1 | Targeted myocardial gene expression in failing hearts by RNA sequencing. (Dhar K, Moulton AM, Rome E, Qiu F, Kittrell J, Raichlin E, Zolty R, Um JY, Moulton MJ, Basma H, Anderson DR, Eudy JD, Lowes BD) J Transl Med 2016 Nov 25;14(1):327 21 Citations |
2 | Gene expression profiling of patient-derived pancreatic cancer xenografts predicts sensitivity to the BET bromodomain inhibitor JQ1: implications for individualized medicine efforts. (Bian B, Bigonnet M, Gayet O, Loncle C, Maignan A, Gilabert M, Moutardier V, Garcia S, Turrini O, Delpero JR, Giovannini M, Grandval P, Gasmi M, Ouaissi M, Secq V, Poizat F, Nicolle R, Blum Y, Marisa L, Rubis M, Raoul JL, Bradner JE, Qi J, Lomberk G, Urrutia R, Saul A, Dusetti N, Iovanna J) EMBO Mol Med 2017 Apr;9(4):482-497 58 Citations |
4 | Association of Gel-Forming Mucins and Aquaporin Gene Expression With Hearing Loss, Effusion Viscosity, and Inflammation in Otitis Media With Effusion. (Samuels TL, Yan JC, Khampang P, Dettmar PW, MacKinnon A, Hong W, Johnston N, Papsin BC, Chun RH, McCormick ME, Kerschner JE) JAMA Otolaryngol Head Neck Surg 2017 Aug 01;143(8):810-817 22 Citations |
5 | SmgGDS is a transient nucleolar protein that protects cells from nucleolar stress and promotes the cell cycle by regulating DREAM complex gene expression. (Gonyo P, Bergom C, Brandt AC, Tsaih SW, Sun Y, Bigley TM, Lorimer EL, Terhune SS, Rui H, Flister MJ, Long RM, Williams CL) Oncogene 2017 Dec 14;36(50):6873-6883 12 Citations |
2 | Glial fibrillary acidic protein promoter determines transgene expression in satellite glial cells following intraganglionic adeno-associated virus delivery in adult rats. (Xiang H, Xu H, Fan F, Shin SM, Hogan QH, Yu H) J Neurosci Res 2018 Mar;96(3):436-448 9 Citations |
1 | Comparative Gene Expression Analyses Reveal Distinct Molecular Signatures between Differentially Reprogrammed Cardiomyocytes. (Zhou Y, Wang L, Liu Z, Alimohamadi S, Yin C, Liu J, Qian L) Cell Rep 2017 Sep 26;20(13):3014-3024 49 Citations |
1 | Gene Expression Profiling and Heterogeneity of Nonspecific Orbital Inflammation Affecting the Lacrimal Gland. (Rosenbaum JT, Choi D, Harrington CA, Wilson DJ, Grossniklaus HE, Sibley CH, Salek SS, Ng JD, Dailey RA, Steele EA, Hayek B, Craven CM, Edward DP, Maktabi AMY, Al Hussain H, White VA, Dolman PJ, Czyz CN, Foster JA, Harris GJ, Bee YS, Tse DT, Alabiad CR, Dubovy SR, Kazim M, Selva D, Yeatts RP, Korn BS, Kikkawa DO, Silkiss RZ, Sivak-Callcott JA, Stauffer P, Planck SR) JAMA Ophthalmol 2017 Nov 01;135(11):1156-1162 17 Citations |
1 | The regulation of renal and extrarenal renin gene expression in the mouse (Jones CA, Fabian JR, Abel KJ, Sigmund CD, Gross KW) Cellular and Molecular Biology of the Renin-Angiotensin System 1 January 2018:33-57 9 Citations |
1 | Evolution of Pediatric Inflammatory Bowel Disease Unclassified (IBD-U): Incorporated With Serological and Gene Expression Profiles. (Chandradevan R, Hofmekler T, Mondal K, Harun N, Venkateswaran S, Somineni HK, Ballengee CR, Kim MO, Griffiths A, Noe JD, Crandall WV, Snapper S, Rabizadeh S, Rosh JR, Walters TD, Bertha M, Dubinsky MC, Denson LA, Sauer CG, Markowitz JF, LeLeiko NS, Hyams JS, Kugathasan S) Inflamm Bowel Dis 2018 Sep 15;24(10):2285-2290 15 Citations |
4 | Outcomes of Measurable Residual Disease in Pediatric Acute Myeloid Leukemia before and after Hematopoietic Stem Cell Transplant: Validation of Difference from Normal Flow Cytometry with Chimerism Studies and Wilms Tumor 1 Gene Expression. (Jacobsohn DA, Loken MR, Fei M, Adams A, Brodersen LE, Logan BR, Ahn KW, Shaw BE, Kletzel M, Olszewski M, Khan S, Meshinchi S, Keating A, Harris A, Teira P, Duerst RE, Margossian SP, Martin PL, Petrovic A, Dvorak CC, Nemecek ER, Boyer MW, Chen AR, Davis JH, Shenoy S, Savasan S, Hudspeth MP, Adams RH, Lewis VA, Kheradpour A, Kasow KA, Gillio AP, Haight AE, Bhatia M, Bambach BJ, Haines HL, Quigg TC, Greiner RJ, Talano JM, Delgado DC, Cheerva A, Gowda M, Ahuja S, Ozkaynak M, Mitchell D, Schultz KR, Fry TJ, Loeb DM, Pulsipher MA) Biol Blood Marrow Transplant 2018 Oct;24(10):2040-2046 28 Citations |
1 | Chromatin-associated APC regulates gene expression in collaboration with canonical WNT signaling and AP-1. (Hankey W, Chen Z, Bergman MJ, Fernandez MO, Hancioglu B, Lan X, Jegga AG, Zhang J, Jin VX, Aronow BJ, Wang Q, Groden J) Oncotarget 2018 Jul 27;9(58):31214-31230 5 Citations |
1 | Robust interferon signature and suppressed tissue repair gene expression in synovial tissue from patients with postinfectious, Borrelia burgdorferi-induced Lyme arthritis. (Lochhead RB, Arvikar SL, Aversa JM, Sadreyev RI, Strle K, Steere AC) Cell Microbiol 2019 Feb;21(2):e12954 26 Citations |
1 | Exploring drivers of gene expression in the Cancer Genome Atlas. (Rau A, Flister M, Rui H, Auer PL) Bioinformatics 2019 Jan 01;35(1):62-68 18 Citations |
1 | The Importance of Biologic Knowledge and Gene Expression Context for Genomic Data Interpretation. (Zimmermann MT) Front Genet 2018;9:670 6 Citations |
1 | Prioritizing Crohn's disease genes by integrating association signals with gene expression implicates monocyte subsets. (Gettler K, Giri M, Kenigsberg E, Martin J, Chuang LS, Hsu NY, Denson LA, Hyams JS, Griffiths A, Noe JD, Crandall WV, Mack DR, Kellermayer R, Abraham C, Hoffman G, Kugathasan S, Cho JH) Genes Immun 2019 Sep;20(7):577-588 12 Citations |
1 | Genetic variant predictors of gene expression provide new insight into risk of colorectal cancer. (Bien SA, Su YR, Conti DV, Harrison TA, Qu C, Guo X, Lu Y, Albanes D, Auer PL, Banbury BL, Berndt SI, Bézieau S, Brenner H, Buchanan DD, Caan BJ, Campbell PT, Carlson CS, Chan AT, Chang-Claude J, Chen S, Connolly CM, Easton DF, Feskens EJM, Gallinger S, Giles GG, Gunter MJ, Hampe J, Huyghe JR, Hoffmeister M, Hudson TJ, Jacobs EJ, Jenkins MA, Kampman E, Kang HM, Kühn T, Küry S, Lejbkowicz F, Le Marchand L, Milne RL, Li L, Li CI, Lindblom A, Lindor NM, Martín V, McNeil CE, Melas M, Moreno V, Newcomb PA, Offit K, Pharaoh PDP, Potter JD, Qu C, Riboli E, Rennert G, Sala N, Schafmayer C, Scacheri PC, Schmit SL, Severi G, Slattery ML, Smith JD, Trichopoulou A, Tumino R, Ulrich CM, van Duijnhoven FJB, Van Guelpen B, Weinstein SJ, White E, Wolk A, Woods MO, Wu AH, Abecasis GR, Casey G, Nickerson DA, Gruber SB, Hsu L, Zheng W, Peters U) Hum Genet 2019 Apr;138(4):307-326 33 Citations |
1 | Competitive ability during mate competition relates to unique patterns of dopamine-related gene expression in the social decision-making network of male zebra finches. (Eswine SL, Pontinen JK, Heimovics SA) Neurosci Lett 2019 Jul 27;706:30-35 3 Citations |
2 | Deletion of Tet proteins results in quantitative disparities during ESC differentiation partially attributable to alterations in gene expression. (Reimer M Jr, Pulakanti K, Shi L, Abel A, Liang M, Malarkannan S, Rao S) BMC Dev Biol 2019 Jul 08;19(1):16 7 Citations |
2 | Regeneration Rosetta: An Interactive Web Application To Explore Regeneration-Associated Gene Expression and Chromatin Accessibility. (Rau A, Dhara SP, Udvadia AJ, Auer PL) G3 (Bethesda) 2019 Dec 03;9(12):3953-3959 2 Citations |
1 | Integrated pan-cancer gene expression and drug sensitivity analysis reveals SLFN11 mRNA as a solid tumor biomarker predictive of sensitivity to DNA-damaging chemotherapy. (Shee K, Wells JD, Jiang A, Miller TW) PLoS One 2019;14(11):e0224267 26 Citations |
1 | A Comparison of Inducible Gene Expression Platforms: Implications for Recombinant Adeno-Associated Virus (rAAV) Vector-Mediated Ocular Gene Therapy. (Lipinski DM) Adv Exp Med Biol 2019;1185:79-83 4 Citations |
1 | Sleep disturbances and inflammatory gene expression among pregnant women: Differential responses by race. (Carroll JE, Rentscher KE, Cole SW, Luo JJ, Ramilo O, Webber S, Lamkin DM, Christian LM) Brain Behav Immun 2020 Aug;88:654-660 12 Citations |
1 | Reciprocal fine-tuning of progesterone and prolactin-regulated gene expression in breast cancer cells. (Holloran SM, Nosirov B, Walter KR, Trinca GM, Lai Z, Jin VX, Hagan CR) Mol Cell Endocrinol 2020 Jul 01;511:110859 3 Citations |
1 | Cell type specific gene expression profiling reveals a role for complement component C3 in neutrophil responses to tissue damage. (Houseright RA, Rosowski EE, Lam PY, Tauzin SJM, Mulvaney O, Dewey CN, Huttenlocher A) Sci Rep 2020 Sep 24;10(1):15716 12 Citations |
1 | Influence of gene expression on survival of clear cell renal cell carcinoma. (Berglund A, Amankwah EK, Kim YC, Spiess PE, Sexton WJ, Manley B, Park HY, Wang L, Chahoud J, Chakrabarti R, Yeo CD, Luu HN, Pietro GD, Parker A, Park JY) Cancer Med 2020 Nov;9(22):8662-8675 11 Citations |
1 | Association of Baseline Luminal Narrowing With Ileal Microbial Shifts and Gene Expression Programs and Subsequent Transmural Healing in Pediatric Crohn Disease. (Ta AD, Ollberding NJ, Karns R, Haberman Y, Alazraki AL, Hercules D, Baldassano R, Markowitz J, Heyman MB, Kim S, Kirschner B, Shapiro JM, Noe J, Oliva-Hemker M, Otley A, Pfefferkorn M, Kellermayer R, Snapper S, Rabizadeh S, Xavier R, Dubinsky M, Hyams J, Kugathasan S, Jegga AG, Dillman JR, Denson LA) Inflamm Bowel Dis 2021 Oct 20;27(11):1707-1718 5 Citations |
1 | Stavniichuk R, DeLaForest A, Thompson CA, Miller J, Souza RF, Battle MA.
GATA4 blocks squamous epithelial cell gene expression in human esophageal
squamous cells. Sci Rep. 2021 Feb 5;11(1):3206. doi: 10.1038/s41598-021-82557-x.
PMID: 33547361; PMCID: PMC7864948. () |
1 | GATA4 blocks squamous epithelial cell gene expression in human esophageal squamous cells. (Stavniichuk R, DeLaForest A, Thompson CA, Miller J, Souza RF, Battle MA) Sci Rep 2021 Feb 05;11(1):3206 5 Citations |
1 | Gene expression profiling impacts treatment decision making in newly diagnosed multiple myeloma patients in the prospective PROMMIS trial. (Biran N, Dhakal B, Lentzsch S, Siegel D, Usmani SZ, Rossi A, Rosenbaum C, Bhutani D, Vesole DH, Rodriguez C, Nooka AK, van Rhee F, Stork-Sloots L, de Snoo F, Bhattacharyya PK, Dash DP, Zümrütçü S, van Vliet MH, Hari P, Niesvizky R) EJHaem 2021 Aug;2(3):375-384 |
1 | Gene expression profiling impacts treatment decision making in newly diagnosed multiple myeloma patients in the prospective PROMMIS trial (Noa Biran, Binod Dhakal, Suzanne Lentzsch, David Siegel, Saad Z. Usmani, Adriana Rossi, Cara Rosenbaum, Divaya Bhutani, David H. Vesole, Cesar Rodriguez, Ajay K. Nooka, Frits van Rhee, Lisette Stork-Sloots, Femke de Snoo, Pritish K. Bhattacharyya, Durga Prasad Dash, Sena Zümrütçü, Martin H. van Vliet, Parameswaran Hari, Ruben Niesvizky) eJHaem |
6 | Inactivation of the Euchromatic Histone-Lysine N-Methyltransferase 2 Pathway in Pancreatic Epithelial Cells Antagonizes Cancer Initiation and Pancreatitis-Associated Promotion by Altering Growth and Immune Gene Expression Networks. (Urrutia G, de Assuncao TM, Mathison AJ, Salmonson A, Kerketta R, Zeighami A, Stodola TJ, Adsay V, Pehlivanoglu B, Dwinell MB, Zimmermann MT, Iovanna JL, Urrutia R, Lomberk G) Front Cell Dev Biol 2021;9:681153 4 Citations |
1 | Stratification of risk of progression to colectomy in ulcerative colitis via measured and predicted gene expression. (Mo A, Nagpal S, Gettler K, Haritunians T, Giri M, Haberman Y, Karns R, Prince J, Arafat D, Hsu NY, Chuang LS, Argmann C, Kasarskis A, Suarez-Farinas M, Gotman N, Mengesha E, Venkateswaran S, Rufo PA, Baker SS, Sauer CG, Markowitz J, Pfefferkorn MD, Rosh JR, Boyle BM, Mack DR, Baldassano RN, Shah S, LeLeiko NS, Heyman MB, Griffiths AM, Patel AS, Noe JD, Davis Thomas S, Aronow BJ, Walters TD, McGovern DPB, Hyams JS, Kugathasan S, Cho JH, Denson LA, Gibson G) Am J Hum Genet 2021 Sep 02;108(9):1765-1779 5 Citations |
3 | A Comprehensive Review of the Genomics of Multiple Myeloma: Evolutionary Trajectories, Gene Expression Profiling, and Emerging Therapeutics. (Awada H, Thapa B, Awada H, Dong J, Gurnari C, Hari P, Dhakal B) Cells 2021 Aug 02;10(8) 16 Citations |
1 | Stratification of risk of progression to colectomy in ulcerative colitis via measured and predicted gene expression (Mo A, Nagpal S, Gettler K, Haritunians T, Giri M, Haberman Y, Karns R, Prince J, Arafat D, Hsu NY, Chuang LS, Argmann C, Kasarskis A, Suarez-Farinas M, Gotman N, Mengesha E, Venkateswaran S, Rufo PA, Baker SS, Sauer CG, Markowitz J, Pfefferkorn MD, Rosh JR, Boyle BM, Mack DR, Baldassano RN, Shah S, LeLeiko NS, Heyman MB, Griffiths AM, Patel AS, Noe JD, Davis Thomas S, Aronow BJ, Walters TD, McGovern DPB, Hyams JS, Kugathasan S, Cho JH, Denson LA, Gibson G) American Journal of Human Genetics 2 September 2021;108(9):1765-1779 5 Citations |
1 | A gene expression-based model predicts outcome in children with intermediate-risk classical Hodgkin lymphoma. (Johnston RL, Mottok A, Chan FC, Jiang A, Diepstra A, Visser L, Telenius A, Gascoyne RD, Friedman DL, Schwartz CL, Kelly KM, Scott DW, Horton TM, Steidl C) Blood 2022 Feb 10;139(6):889-893 8 Citations |
1 | Enhanced metastatic risk assessment in cutaneous squamous cell carcinoma with the 40-gene expression profile test. (Ibrahim SF, Kasprzak JM, Hall MA, Fitzgerald AL, Siegel JJ, Kurley SJ, Covington KR, Goldberg MS, Farberg AS, Trotter SC, Reed K, Brodland DG, Koyfman SA, Somani AK, Arron ST, Wysong A) Future Oncol 2022 Mar;18(7):833-847 21 Citations |
1 | Gene expression profiling for metastatic risk in head and neck cutaneous squamous cell carcinoma. (Arron ST, Wysong A, Hall MA, Bailey CN, Covington KR, Kurley SJ, Goldberg MS, Kasprzak JM, Somani AK, Ibrahim SF, Brodland DG, Cleaver NJ, Maher IA, Xia Y, Koyfman SA, Newman JG) Laryngoscope Investig Otolaryngol 2022 Feb;7(1):135-144 5 Citations |
2 | Use of an Interspecies Chimeric Receptor for Inducible Gene Expression Reveals that Metabolic Flux through the Peptidoglycan Biosynthesis Pathway is an Important Driver of Cephalosporin Resistance in Enterococcus faecalis. (Mascari CA, Djorić D, Little JL, Kristich CJ) J Bacteriol 2022 Apr 19;204(4):e0060221 4 Citations |
1 | The Symbiotic Effect of a New Nutraceutical with Yeast β-Glucan, Prebiotics, Minerals, and Silybum marianum (Silymarin) for Recovering Metabolic Homeostasis via Pgc-1α, Il-6, and Il-10 Gene Expression in a Type-2 Diabetes Obesity Model. (Santamarina AB, Moraes RCM, Nehmi Filho V, Murata GM, de Freitas JA, de Miranda DA, Cerqueira ARA, Costa SKP, Ferreira AFF, Britto LR, de Camargo JA, Rodrigues de Oliveira D, de Jesus FN, Otoch JP, Pessoa AFM) Antioxidants (Basel) 2022 Feb 23;11(3) 5 Citations |
3 | Downregulation of neurodevelopmental gene expression in iPSC-derived cerebral organoids upon infection by human cytomegalovirus. (O'Brien BS, Mokry RL, Schumacher ML, Pulakanti K, Rao S, Terhune SS, Ebert AD) iScience 2022 Apr 15;25(4):104098 11 Citations |
1 | Exploratory Analysis of Associations Between Whole Blood Mitochondrial Gene Expression and Cancer-Related Fatigue Among Breast Cancer Survivors. (Kleckner AS, Kleckner IR, Culakova E, Wojtovich AP, Klinedinst NJ, Kerns SL, Hardy SJ, Inglis JE, Padula GDA, Mustian KM, Janelsins MC, Dorsey SG, Saligan LN, Peppone LJ) Nurs Res 2022 Sep-Oct 01;71(5):411-417 2 Citations |
1 | Editorial: Understanding the gene expression of β cell dysfunction in diabetes. (Sjöholm Å, Corbett JA, Leung PS, Portha B) Front Endocrinol (Lausanne) 2022;13:1069991 1 Citation |
1 | Gene Expression Alterations in Peripheral Blood Following Sport-Related Concussion in a Prospective Cohort of Collegiate Athletes: A Concussion Assessment, Research and Education (CARE) Consortium Study (Simpson E, Reiter JL, Ren J, Zhang Z, Nudelman KN, Riggen LD, Menser MD, Harezlak J, Foroud TM, Saykin AJ, Brooks A, Cameron KL, Duma SM, McGinty G, Rowson S, Svoboda SJ, Broglio SP, McCrea MA, Pasquina PF, McAllister TW, Liu Y, Campbell D, Jackson J, Houston M, Giza C, Goldman J, Guskiewicz K, Mihalik JP) Sports Medicine 2023 |
1 | Periodic hypoxia, intermittent pain, and caffeine in male and female neonatal rats: corticosterone, insulin resistance, and hepatic gene expression. (Gehrand AL, Phillips JM, Raff H) Am J Physiol Regul Integr Comp Physiol 2023 Jun 01;324(6):R708-R719 |
1 | Distinct gene expression profiles underlie morphological and etiological differences in pediatric cataracts. (Shanbagh S, Matalia J, Kannan R, Shetty R, Panmand P, Muthu SO, Chaurasia SS, Deshpande V, Bhattacharya SS, Gopalakrishnan AV, Ghosh A) Indian J Ophthalmol 2023 May;71(5):2143-2151 |
2 | Neutralizing antibodies with neurotropic factor treatment maintain neurodevelopmental gene expression upon exposure to human cytomegalovirus. (O'Brien BS, Mokry RL, Schumacher ML, Rosas-Rogers S, Terhune SS, Ebert AD) J Virol 2023 Oct 31;97(10):e0069623 1 Citation |
1 | Gene Expression Alterations in Peripheral Blood Following Sport-Related Concussion in a Prospective Cohort of Collegiate Athletes: A Concussion Assessment, Research and Education (CARE) Consortium Study. (Simpson E, Reiter JL, Ren J, Zhang Z, Nudelman KN, Riggen LD Jr, Menser MD, Harezlak J, Foroud TM, Saykin AJ, Brooks A, Cameron KL, Duma SM, McGinty G, Rowson S, Svoboda SJ, Broglio SP, McCrea MA, Pasquina PF, McAllister TW, Liu Y, CARE Consortium Investigators) Sports Med 2023 Nov 08 |
1 | High-depth RNA-Seq data sets to investigate the differences in gene expression mediated by phasevarions in non-typeable Haemophilus influenzae. (Atack JM, Brockman KL, Bakaletz LO, Jennings MP) Microbiol Resour Announc 2023 Dec 14;12(12):e0078523 |
3 | Experiences of racial discrimination and adverse gene expression among black individuals in a level 1 trauma center sample. (Bird CM, Kate Webb E, Cole SW, Tomas CW, Knight JM, Timmer-Murillo SC, Larson CL, deRoon-Cassini TA, Torres L) Brain Behav Immun 2024 Feb;116:229-236 1 Citation |