CURRICULUM VITAE
Matthew Budde PhD
Matthew Budde PhD
Associate Professor
Department of Neurosurgery
Division of Research
Department of Neurosurgery
Division of Research
OFFICE ADDRESS: |
Froedtert Hospital |
9200 W Wisconsin Ave |
Milwaukee, WI 53226 |
Phone: 414-384-2000 x46948 |
Email: mdbudde@mcw.edu |
EDUCATION: |
2001 B.S. Psychology, University of Wisconsin, Madison, WI |
2008 Ph.D. Neuroscience, Washington University, St Louis, MO |
POSTGRADUATE TRAINING AND FELLOWSHIP APPOINTMENTS: |
2008 - 2011 Postdoctoral Fellow, Radiology and Imaging Sciences, Clinical Center, National Institutes of Health, Bethesda, MD |
FACULTY APPOINTMENTS: |
2011 - 2016 Assistant Professor, Department of Neurosurgery, Medical College of Wisconsin, Milwaukee, WI |
2016 - Present Associate Professor, Department of Neurosurgery, Medical College of Wisconsin, Milwaukee, WI |
2020 - Present Research Health Scientist, Milwaukee VA Medical Center, Milwaukee, WI |
ADMINISTRATIVE APPOINTMENTS: |
2011 - Present Faculty Member, Cancer Center, Medical College of Wisconsin, Milwaukee, WI |
2011 - Present Faculty Member, Center for Imaging Research, Medical College of Wisconsin, Milwaukee, WI |
2011 - Present Faculty Member, Neuroscience Research Center, Medical College of Wisconsin, Milwaukee, WI |
2012 - Present Faculty Member, Clinical and Translational Scientific Institute of Southeastern Wisconsin, Milwaukee, WI |
2014 - Present Faculty Member, Biophysics Graduate Program, Medical College of Wisconsin, Milwaukee, WI |
2024 - Present Co-Director, Neurosurgery Research Labs, Medical College of Wisconsin |
EDUCATIONAL ADMINISTRATIVE APPOINTMENTS: |
2020 - Present Co-Director of Resident Research, Neurosurgery, Medical College of Wisconsin |
2021 - Present Member: Mentoring Committee, Neuroscience Doctoral Program, Medical College of Wisconsin |
RESEARCH ADMINISTRATIVE APPOINTMENTS: |
2013 - Present Director: Confocal Microscopy Core, Clement J. Zablocki VA Medical Center, Milwaukee, WI |
2014 - Present Chair - Shared Equipment Committee, Clement J. Zablocki VA Medical Center, Milwaukee, WI |
AWARDS AND HONORS: |
05/2006 Young Investigator Award Finalist, International Society for Magnetic Resonance in Medicine |
05/2010 Junior Fellow Recipient, International Society for Magnetic Resonance in Medicine |
02/2011 Fellows Award for Research Excellence (FARE), National Institutes of Health, Bethesda, National Institutes of Health |
2017 Outstanding Graduate School Educator, Medical College of Wisconsin |
2019 Outstanding Graduate School Educator, Medical College of Wisconsin |
2021 Outstanding Graduate School Educator, Medical College of Wisconsin |
MEMBERSHIPS IN HONORARY AND PROFESSIONAL SOCIETIES: |
11/2005 - Present International Society for Magnetic Resonance in Medicine |
11/2005 - Present Society for Neuroscience |
EDITORSHIPS/EDITORIAL BOARDS/JOURNAL REVIEWS: |
Editorial Board |
2021 - Present Journal of Neurotrauma |
Ad-Hoc Reviewer |
Brain |
Magnetic Resonance in Medicine |
Neuroscience Letters |
Human Brain Mapping |
American Journal of Neuroradiology |
NeuroImage |
Journal of Magnetic Resonance Imaging |
NMR in Biomedicine |
Journal of Neuroradiology |
Biological Psychiatry |
Frontiers in Brain Imaging Methods |
LOCAL/REGIONAL APPOINTED LEADERSHIP AND COMMITTEE POSITIONS: |
2019 Ad Hoc Reviewer, Grant Review Panel, Clinical and Translational Science Institute of Southeastern Wisconsin |
2019 Ad Hoc Reviewer, Grant Review Panel, Advancing a Healthier Wisconsin |
NATIONAL ELECTED/APPOINTED LEADERSHIP AND COMMITTEE POSITIONS: |
2010 - 2011 Session Moderator, Annual Meeting, Intl. Society for Magnetic Resonance in Medicine |
2016 - 2018 Ad Hoc Reviewer, Career Development Study Section (RRD9), Department of Veterans Affairs |
2016 Ad Hoc Reviewer, Early Career Reviewer Program, National Institutes of Health |
2018 Ad Hoc Reviewer, Acute Neural Injury Study Section, National Institutes of Health |
2019 Ad Hoc Reviewer, Special Emphasis Panel, National Institutes of Health |
10/2020 Co-Chair, Acute Neural Injury and Epilepsy Study Section, National Institutes of Health |
2020 - 2024 Member, Acute Neural Injury and Epilepsy Study Section, National Institutes of Health |
2020 Ad Hoc Reviewer, Emerging Imaging Technologies in Neuroscience Study Section, National Institutes of Health |
INTERNATIONAL ELECTED/APPOINTED LEADERSHIP AND COMMITTEE POSITIONS: |
2017 - 2020 Executive Committee Member, White Matter Study Group, International Society for Magnetic Resonance in Medicine |
RESEARCH GRANTS/AWARDS/CONTRACTS/PROJECTS: | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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INVITED LECTURES/WORKSHOPS/PRESENTATIONS: |
International |
Structure Tensor Analysis of Histological Images to Examine Brain Microstructure, Organization for Human Brain Mapping/Intl Society for Magnetic Resonance in Medicine First Annual Joint Virtual Conference, 07/11/2012 |
What are the Links of Diffusion Measurements To Histology, ISMRM Workshop on Diffusion MRI, Split, Croatia, 10/14/2013 |
Validation and Biological Meaning of Diffusion Metrics & Tractography, Organization for Human Brain Mapping Annual Meeting, Honolulu, HI, 06/14/2015 |
Educational Session: Validation of Inferences about Tissue Microstructure, ISMRM Annual Meeting, Singapore, 05/07/2016 |
The Pathology Underlying Diffusion MRI Markers of Neurological Injury, Japanese Society for Neuroradiology, Tokyo, Japan, 02/17/2017 |
Rethinking Diffusion MRI of the Injured Spinal Cord: Rodent Models and Translational Prospects, CPIN Emerging Leaders in Neuroscience Lecture, Toronto, Canada, 06/19/2017 |
Application of Microstructure/Diffusion-Mediated Signals to Study Disease, International Society for Magnetic Resonance in Medicine, Paris, France, 06/16/2018 |
Brain Microstructure: Critical Review, International Society for Magnetic Resonance in Medicine, Virtual, 05/2021 |
Translational MRI in Spinal Cord Injury, University of Eastern Finland, 11/16/2021 |
National |
Optical and MR Imaging of Animal Models of Brain Injury, Society for Brain Mapping and Therapeutics, Baltimore, MD, 05/14/2013 |
Diffusion MRI as a Biomarker in TBI, Correlations, Conclusions, and Caveats, National Neurotrauma Society Annual Meeting, Lexington, KY, 06/27/2016 |
Detection and Validation of Neuronal Injury with Diffusion MRI, Gordon Research Conference:Multi-Modal Approaches and Histopathological Validation in Tissue Microstructure Imaging, South Hadley, MA, 07/11/2019 |
Regional |
Examining animal models of TBI with MRI: Current Status and Future Directions, New Frontiers in the Translational Science, Clinical Management and Prevention of Traumatic Brain Injury, Medical College of Wisconsin, 05/17/2012 |
Investigating Traumatic Brain Injury in Animal Models using Diffusion Tensor Imaging, Bioengineering Department Seminar, University of Illinois-Chicago, 10/02/2012 |
What can diffusion MRI tell us about brain injury and pathology?, Advanced Imaging Research Center Invited Seminar, Oregon Health Sciences University, 03/19/2014 |
MRI in preclinical brain and spinal cord trauma: Pulse sequence developments and collaboration initiatives, Preclinical Imaging Consortium, Chicago, IL, 04/28/2019 |
Local |
The Pathological Features Underlying Diffusion Tensor Imaging Changes in the Injured Rodent Brain, Mouse Imaging Facility Seminar Series, National Institutes of Health, 03/01/2011 |
Detecting Acute Axonal Injury in Mouse SCI with Diffusion Tensor Imaging, Sanford J Larson, MD PhD, Lecture and Scientific Day, Medical College of Wisconsin, 09/09/2011 |
The Pathology Underlying Diffusion MRI Abnormalities in the Injured Brain, Department of Biophysics Seminar Series, Medical College of Wisconsin, 10/21/2011 |
Investigating Traumatic Brain Injury in Animal Models using Diffusion Tensor Imaging, Integrative Neuroscience Research Center Seminar, Marquette University, 10/23/2012 |
Advanced MRI in Animal Models of Mild Traumatic Brain Injury, Department of Physical Medicine and Rehabilitation Research Grand Rounds, Medical College of Wisconsin, 03/15/2013 |
Imaging CNS Microstructure with Diffusion MRI: Moving Beyond DTI, Biophysics Departmental Seminar, Medical College of Wisconsin, 11/07/2014 |
Diffusion MRI in Acute Neurological Injury, Department of Radiology Research Seminar Series, Medical College of Wisconsin, 01/15/2016 |
Spine Imaging Research Panel, MCW Spine Research Day, Medical College of Wisconsin, 09/10/2018 |
PEER REVIEWED WORKSHOPS/PRESENTATIONS: |
International |
Budde MD, Kim JH., Klein RS, Russell JH, Cross AH, Song SK., Extensive axonal damage in the spinal cord of EAE mice detected with in vivo DTI., ISMRM Annual Meeting, Miami Beach, FL, 05/13/2005 |
Budde MD, Song SK, Longitudinal investigation of axonal and myelin damage in the spinal cords of mice with experimental autoimmune encephalomyelitis using in vivo diffusion tensor imaging., Society for Neuroscience Annual Meeting, Washington, DC, 11/13/2005 |
Budde MD, Liang HF, Cross AH, & Song SK., Axial Diffusivity Correlates with the Degree of Neurological Disability in a Mouse Model of Multiple Sclerosis, ISMRM Annual Meeting, Seattle, WA, 05/08/2006 |
Budde, MD, Kim JH, Klein RS, Russell JH, Cross AH, Song SK., Toward Accurate Diagnosis of White Matter Pathology Using Diffusion Tensor Imaging., ISMRM Annual Meeting, Seattle, WA, 05/08/2006 |
Budde MD & Frank JA, Neurite Beading is Sufficient to Decrease the Apparent Diffusion Coefficient Following Ischemic Stroke., ISMRM Annual Meeting, Stockholm, Sweden, 05/03/2010 |
Budde MD, Resnick M, Gold E, Jordan EK, Frank JA., Microscopic Morphology of Brain and Bone Metastases in a Rat Breast Cancer Model by Diffusion MRI., ISMRM Annual Meeting, Stockholm, Sweden, 05/04/2010 |
Budde MD, Gold E, Jordan EK, Smith M, Frank JA., Hypoxia Detected with Phase Contrast MRI is an Early Event in Micrometastatic Breast Cancer Development in the Rat Brain., ISMRM Annual Meeting, Stockholm, Sweden, 05/04/2010 |
Budde MD, Janes LA, Gold E, Turtzo LC, Frank JA., Microscopic Determinates of Anisotropy in the Injured Rat Brain using Fourier Analysis of Histological Sections., ISMRM Annual Meeting, Montreal, Canada, 05/11/2011 |
Budde MD, Structure Tensor Analysis of Histological Images to Examine Brain Microstructure., ISMRM Annual Meeting, Melbourne, Australia, 05/09/2012 |
Stemper B, Pintar F, Shah A, McCrea M, Kurpad SK, Cullinan W, Olsen C, Thomas D, Budde M, Differential Effects of Rotational Acceleration Magnitude and Duration on Behavioral Outcomes in Rats Following Traumatic Brain Injury, International Brain Injury Association World Congress, San Francisco, CA, 03/20/2014 |
Budde MD, Completing the Circle: Moving Multi-Parametric Neuro MRI into Clinical Practice & Trials, Member Initiated Symposium Organizer, Montreal, Canada, - 05/2019 |
COMMITTEE SERVICE: |
Medical College of Wisconsin |
2017 - Present Member, Neuroscience Graduate Program Admissions Committee |
2020 - Present Member, Advisory Committee, Center for Imaging Research, Medical College of Wisconsin |
2021 Member, Chair Search Committee, Department of Biophysics, Medical College of Wisconsin |
Hospital |
2013 - 2019 Member (Non-voting), Research and Development Committee, Clement J. Zablocki VA Medical Center, Milwaukee, WI |
2019 Chair, VA Equipment Committee, Milwaukee VA Medical Center |
MCW TEACHING ACTIVITIES: |
Medical Student Education |
Lecturer: Introduction to Medical Imaging |
Graduate Student Education |
09/2015 - 12/2015 Course Director: Biophysics MRI Journal Club |
09/2017 - 12/2017 Course Director: Biophysics MRI Journal Club |
08/2019 - 12/2019 Course Director: Advanced Systems Neuroscience |
08/2021 - 12/2021 Course Director: Advanced Systems Neuroscience |
01/2022 - 05/2022 Co-Director: MRI Contrast Mechanisms |
01/2024 - 05/2024 Co-Director: MRI Contrast Mechanisms |
Community/Lay Public |
06/2012 Judge: Summer Program for Undergraduate Research |
MCW STUDENTS, FACULTY, RESIDENTS AND CLINICAL/RESEARCH FELLOWS MENTORED: |
Medical Students |
05/01/2013 - 08/14/2013 John Teijido, Research Pathway Mentor, Medical College of Wisconsin |
Graduate Students |
PhD Students Advised |
07/2014 - 05/2017 Nathan Skinner, Medical Scientist Training Program, Medical College of Wisconsin |
2017 - Present Seung Yi Li, Biophysics Graduate Program, Medical College of Wisconsin |
2018 - Present Briana Meyer, Biophysics Graduate Program, Medical College of Wisconsin |
PhD Committees |
2015 - 2017 Zhan Xu, Biophysics Graduate Program, Medical College of Wisconsin |
08/2016 - 10/2016 Sean McGarry, Dissertation Committee, Medical College of Wisconsin |
Postdoctoral Researchers |
07/2013 - 05/2015 Elizabeth Zakszewski, Mentor, Medical College of Wisconsin |
2019 - Present Spencer Murphy, Mentor, Medical College of Wisconsin |
EXTRAMURAL STUDENTS, FACULTY, RESIDENTS, AND CLINICAL/RESEARCH FELLOWS MENTORED: |
Graduate Students |
PhD Committees |
2011 - 2013 Michael Jirjis, Diffusion Tensor Imaging of the Central Nervous System Following an Injury to the Spinal Cord and Cell Transplant, Marquette University |
2015 - 2018 Olesya Motovylyak, Biomedical Engineering, Marquette University |
2017 Allen Martin, Multiparametric Quantitative MRI of the Cervical Spinal Cord to Measure Microstructure and Tissue Injury: Development, Validation, and Applications of a Clinically Feasible Protocol, University of Toronto, External Examiner |
PhD Students Advised |
2017 - Present Seungtaek Li, Biomedical Engineering, Marquette University |
PhD |
11/17/2021 Raimo Salo, Advanced Microscopic Validation of Diffusion MRI in Rat Brain, University of Eastern Finland, Dissertation Opponent |
BIBLIOGRAPHY |
Refereed Journal Publications/Original Papers |
1. Cabeza R, Daselaar SM, Dolcos F, Prince SE, Budde M, Nyberg L. Task-independent and task-specific age effects on brain activity during working memory, visual attention and episodic retrieval. Cereb Cortex. 2004 Apr;14(4):364-75. |
2. Cabeza R, Prince SE, Daselaar SM, Greenberg DL, Budde M, Dolcos F, LaBar KS, Rubin DC. Brain activity during episodic retrieval of autobiographical and laboratory events: an fMRI study using a novel photo paradigm. J Cogn Neurosci. 2004 Nov;16(9):1583-94. |
3. Kim JH, Budde MD, Liang HF, Klein RS, Russell JH, Cross AH, Song SK. Detecting axon damage in spinal cord from a mouse model of multiple sclerosis. Neurobiol Dis. 2006 Mar;21(3):626-32. |
4. Budde MD, Kim JH, Liang HF, Schmidt RE, Russell JH, Cross AH, Song SK. Toward accurate diagnosis of white matter pathology using diffusion tensor imaging. Magn Reson Med. 2007 Apr;57(4):688-95. |
5. Kim JH, Trinkaus K, Ozcan A, Budde MD, Song SK. Postmortem delay does not change regional diffusion anisotropy characteristics in mouse spinal cord white matter. NMR Biomed. 2007 May;20(3):352-9. |
6. Haldar JP, Hernando D, Budde MD, Wang Q, Song SK, Liang ZP. High-resolution MR metabolic imaging. Annu Int Conf IEEE Eng Med Biol Soc. 2007;2007:4324-6. |
7. Budde MD, Kim JH, Liang HF, Russell JH, Cross AH, Song SK. Axonal injury detected by in vivo diffusion tensor imaging correlates with neurological disability in a mouse model of multiple sclerosis. NMR Biomed. 2008 Jul;21(6):589-97. PMCID: PMC2602834 |
8. Budde MD, Xie M, Cross AH, Song SK. Axial diffusivity is the primary correlate of axonal injury in the experimental autoimmune encephalomyelitis spinal cord: a quantitative pixelwise analysis. J Neurosci. 2009 Mar 04;29(9):2805-13. PMCID: PMC2673458 |
9. McCandless EE, Budde M, Lees JR, Dorsey D, Lyng E, Klein RS. IL-1R signaling within the central nervous system regulates CXCL12 expression at the blood-brain barrier and disease severity during experimental autoimmune encephalomyelitis. J Immunol. 2009 Jul 01;183(1):613-20. PMCID: PMC2892701 |
10. Kim JH, Loy DN, Wang Q, Budde MD, Schmidt RE, Trinkaus K, Song SK. Diffusion tensor imaging at 3 hours after traumatic spinal cord injury predicts long-term locomotor recovery. J Neurotrauma. 2010 Mar;27(3):587-98. PMCID: PMC2867549 |
11. Xie M, Tobin JE, Budde MD, Chen CI, Trinkaus K, Cross AH, McDaniel DP, Song SK, Armstrong RC. Rostrocaudal analysis of corpus callosum demyelination and axon damage across disease stages refines diffusion tensor imaging correlations with pathological features. J Neuropathol Exp Neurol. 2010 Jul;69(7):704-16. PMCID: PMC2901930 |
12. Budde MD, Frank JA. Neurite beading is sufficient to decrease the apparent diffusion coefficient after ischemic stroke. Proc Natl Acad Sci U S A. 2010 Aug 10;107(32):14472-7. PMCID: PMC2922529 |
13. Klawiter EC, Schmidt RE, Trinkaus K, Liang HF, Budde MD, Naismith RT, Song SK, Cross AH, Benzinger TL. Radial diffusivity predicts demyelination in ex vivo multiple sclerosis spinal cords. Neuroimage. 2011 Apr 15;55(4):1454-60. PMCID: PMC3062747 |
14. Kim JH, Wu TH, Budde MD, Lee JM, Song SK. Noninvasive detection of brainstem and spinal cord axonal degeneration in an amyotrophic lateral sclerosis mouse model. NMR Biomed. 2011 Feb;24(2):163-9. PMCID: PMC5180599 |
15. Budde MD, Janes L, Gold E, Turtzo LC, Frank JA. The contribution of gliosis to diffusion tensor anisotropy and tractography following traumatic brain injury: validation in the rat using Fourier analysis of stained tissue sections. Brain. 2011 Aug;134(Pt 8):2248-60. PMCID: PMC3155707 |
16. Budde MD, Gold E, Jordan EK, Smith-Brown M, Frank JA. Phase contrast MRI is an early marker of micrometastatic breast cancer development in the rat brain. NMR Biomed. 2012 May;25(5):726-36. PMCID: PMC3252479 |
17. Budde MD, Gold E, Jordan EK, Frank JA. Differential microstructure and physiology of brain and bone metastases in a rat breast cancer model by diffusion and dynamic contrast enhanced MRI. Clin Exp Metastasis. 2012 Jan;29(1):51-62. PMCID: PMC3233647 |
18. Thu MS, Bryant LH, Coppola T, Jordan EK, Budde MD, Lewis BK, Chaudhry A, Ren J, Varma NR, Arbab AS, Frank JA. Self-assembling nanocomplexes by combining ferumoxytol, heparin and protamine for cell tracking by magnetic resonance imaging. Nat Med. 2012 Feb 26;18(3):463-7. PMCID: PMC3296876 |
19. Budde MD, Frank JA. Examining brain microstructure using structure tensor analysis of histological sections. Neuroimage. 2012 Oct 15;63(1):1-10. |
20. Vedantam A, Jirjis MB, Schmit BD, Budde MD, Ulmer JL, Wang MC, Kurpad SN. Diffusion tensor imaging and tractography in Brown-Sequard syndrome. Spinal Cord. 2012 Dec;50(12):928-30. |
21. Turtzo LC, Budde MD, Gold EM, Lewis BK, Janes L, Yarnell A, Grunberg NE, Watson W, Frank JA. The evolution of traumatic brain injury in a rat focal contusion model. NMR Biomed. 2013 Apr;26(4):468-79. PMCID: PMC3596464 |
22. Budde MD, Annese J. Quantification of anisotropy and fiber orientation in human brain histological sections. Front Integr Neurosci. 2013;7:3. PMCID: PMC3561729 |
23. Ronen I, Budde M, Ercan E, Annese J, Techawiboonwong A, Webb A. Microstructural organization of axons in the human corpus callosum quantified by diffusion-weighted magnetic resonance spectroscopy of N-acetylaspartate and post-mortem histology. Brain Struct Funct. 2014 Sep;219(5):1773-85. |
24. Budde MD, Shah A, McCrea M, Cullinan WE, Pintar FA, Stemper BD. Primary blast traumatic brain injury in the rat: relating diffusion tensor imaging and behavior. Front Neurol. 2013;4:154. PMCID: PMC3796287 |
25. Leigland LA, Budde MD, Cornea A, Kroenke CD. Diffusion MRI of the developing cerebral cortical gray matter can be used to detect abnormalities in tissue microstructure associated with fetal ethanol exposure. Neuroimage. 2013 Dec;83:1081-7. PMCID: PMC3815979 |
26. Li W, Muftuler LT, Chen G, Ward BD, Budde MD, Jones JL, Franczak MB, Antuono PG, Li SJ, Goveas JS. Effects of the coexistence of late-life depression and mild cognitive impairment on white matter microstructure. J Neurol Sci. 2014 Mar 15;338(1-2):46-56. PMCID: PMC4428544 |
27. Turtzo LC, Lescher J, Janes L, Dean DD, Budde MD, Frank JA. Macrophagic and microglial responses after focal traumatic brain injury in the female rat. J Neuroinflammation. 2014 Apr 24;11:82. PMCID: PMC4022366 |
28. Kamnaksh A, Budde MD, Kovesdi E, Long JB, Frank JA, Agoston DV. Diffusion tensor imaging reveals acute subcortical changes after mild blast-induced traumatic brain injury. Sci Rep. 2014 May 02;4:4809. PMCID: PMC4019232 |
29. Tu TW, Budde MD, Xie M, Chen YJ, Wang Q, Quirk JD, Song SK. Phase-aligned multiple spin-echo averaging: a simple way to improve signal-to-noise ratio of in vivo mouse spinal cord diffusion tensor image. Magn Reson Imaging. 2014 Dec;32(10):1335-43. PMCID: PMC4252722 |
30. Stemper BD, Shah AS, Pintar FA, McCrea M, Kurpad SN, Glavaski-Joksimovic A, Olsen C, Budde MD. Head rotational acceleration characteristics influence behavioral and diffusion tensor imaging outcomes following concussion. Ann Biomed Eng. 2015 May;43(5):1071-88. PMCID: PMC4654450 |
31. Miller AP, Shah AS, Aperi BV, Budde MD, Pintar FA, Tarima S, Kurpad SN, Stemper BD, Glavaski-Joksimovic A. Effects of blast overpressure on neurons and glial cells in rat organotypic hippocampal slice cultures. Front Neurol. 2015;6:20. PMCID: PMC4325926 |
32. Turtzo LC, Budde MD, Dean DD, Gold EM, Lewis BK, Janes L, Lescher J, Coppola T, Yarnell A, Grunberg NE, Frank JA. Failure of intravenous or intracardiac delivery of mesenchymal stromal cells to improve outcomes after focal traumatic brain injury in the female rat. PLoS One. 2015;10(5):e0126551. PMCID: PMC4422703 |
33. Zakszewski E, Schmit B, Kurpad S, Budde MD. Diffusion imaging in the rat cervical spinal cord. J Vis Exp. 2015 Apr 07(98). PMCID: PMC4541495 |
34. Lim YW, Meyer NP, Shah AS, Budde MD, Stemper BD, Olsen CM. Voluntary Alcohol Intake following Blast Exposure in a Rat Model of Mild Traumatic Brain Injury. PLoS One. 2015;10(4):e0125130. PMCID: PMC4409117 |
35. Jirjis MB, Vedantam A, Budde MD, Kalinosky B, Kurpad SN, Schmit BD. Severity of spinal cord injury influences diffusion tensor imaging of the brain. J Magn Reson Imaging. 2016 Jan;43(1):63-74. |
36. Baron CA, Kate M, Gioia L, Butcher K, Emery D, Budde M, Beaulieu C. Reduction of Diffusion-Weighted Imaging Contrast of Acute Ischemic Stroke at Short Diffusion Times. Stroke. 2015 Aug;46(8):2136-41. |
37. Skinner NP, Kurpad SN, Schmit BD, Budde MD. Detection of acute nervous system injury with advanced diffusion-weighted MRI: a simulation and sensitivity analysis. NMR Biomed. 2015 Nov;28(11):1489-506. |
38. Oni-Orisan A, Kaushal M, Li W, Leschke J, Ward BD, Vedantam A, Kalinosky B, Budde MD, Schmit BD, Li SJ, Muqeet V, Kurpad SN. Alterations in Cortical Sensorimotor Connectivity following Complete Cervical Spinal Cord Injury: A Prospective Resting-State fMRI Study. PLoS One. 2016;11(3):e0150351. PMCID: PMC4783046 |
39. Stemper BD, Shah AS, Budde MD, Olsen CM, Glavaski-Joksimovic A, Kurpad SN, McCrea M, Pintar FA. Behavioral Outcomes Differ between Rotational Acceleration and Blast Mechanisms of Mild Traumatic Brain Injury. Front Neurol. 2016;7:31. PMCID: PMC4789366 |
40. Skinner NP, Kurpad SN, Schmit BD, Tugan Muftuler L, Budde MD. Rapid in vivo detection of rat spinal cord injury with double-diffusion-encoded magnetic resonance spectroscopy. Magn Reson Med. 2017 Apr;77(4):1639-1649. PMCID: PMC5285487 |
41. Stemper BD, Shah AS, Chiariello R, Olsen CM, Budde MD, Glavaski-Joksimovic A, McCrea M, Kurpad SN, Pintar FA. Prediction of Post-Concussive Behavioral Changes in a Rodent Model Based on Head Rotational Acceleration Characteristics. Ann Biomed Eng. 2016 Nov;44(11):3252-3265. PMCID: PMC5093216 |
42. Kaushal M, Oni-Orisan A, Chen G, Li W, Leschke J, Ward BD, Kalinosky B, Budde MD, Schmit BD, Li SJ, Muqeet V, Kurpad SN. Evaluation of Whole-Brain Resting-State Functional Connectivity in Spinal Cord Injury: A Large-Scale Network Analysis Using Network-Based Statistic. J Neurotrauma. 2017 Mar 15;34(6):1278-1282. |
43. Kaushal M, Oni-Orisan A, Chen G, Li W, Leschke J, Ward D, Kalinosky B, Budde M, Schmit B, Li SJ, Muqeet V, Kurpad S. Large-Scale Network Analysis of Whole-Brain Resting-State Functional Connectivity in Spinal Cord Injury: A Comparative Study. Brain Connect. 2017 Sep;7(7):413-423. |
44. Martin AR, Tadokoro N, Tetreault L, Arocho-Quinones EV, Budde MD, Kurpad SN, Fehlings MG. Imaging Evaluation of Degenerative Cervical Myelopathy: Current State of the Art and Future Directions. Neurosurg Clin N Am. 2018 Jan;29(1):33-45. |
45. Budde MD, Skinner NP, Muftuler LT, Schmit BD, Kurpad SN. Optimizing Filter-Probe Diffusion Weighting in the Rat Spinal Cord for Human Translation. Front Neurosci. 2017;11:706. PMCID: PMC5742102 |
46. Rao A, Soliman H, Kaushal M, Motovylyak O, Vedantam A, Budde MD, Schmit B, Wang M, Kurpad SN. Diffusion Tensor Imaging in a Large Longitudinal Series of Patients With Cervical Spondylotic Myelopathy Correlated With Long-Term Functional Outcome. Neurosurgery. 2018 Oct 01;83(4):753-760. |
47. Jelescu IO, Budde MD. Design and validation of diffusion MRI models of white matter. Front Phys. 2017 Nov;28. PMCID: PMC5947881 |
48. Skinner NP, Lee SY, Kurpad SN, Schmit BD, Muftuler LT, Budde MD. Filter-probe diffusion imaging improves spinal cord injury outcome prediction. Ann Neurol. 2018 Jul;84(1):37-50. PMCID: PMC6119508 |
49. Budde MD, Skinner NP. Diffusion MRI in acute nervous system injury. J Magn Reson. 2018 Jul;292:137-148. |
50. Muelbl MJ, Slaker ML, Shah AS, Nawarawong NN, Gerndt CH, Budde MD, Stemper BD, Olsen CM. Effects of Mild Blast Traumatic Brain Injury on Cognitive- and Addiction-Related Behaviors. Sci Rep. 2018 Jul 02;8(1):9941. PMCID: PMC6028456 |
51. Motovylyak A, Skinner NP, Schmit BD, Wilkins N, Kurpad SN, Budde MD. Longitudinal <i>In Vivo</i> Diffusion Magnetic Resonance Imaging Remote from the Lesion Site in Rat Spinal Cord Injury. J Neurotrauma. 2019 May 01;36(9):1389-1398. PMCID: PMC6482909 |
52. Nawarawong NN, Slaker M, Muelbl M, Shah AS, Chiariello R, Nelson LD, Budde MD, Stemper BD, Olsen CM. Repeated blast model of mild traumatic brain injury alters oxycodone self-administration and drug seeking. Eur J Neurosci. 2019 Aug;50(3):2101-2112. PMCID: PMC6814147 |
53. Shabani S, Kaushal M, Budde M, Schmit B, Wang MC, Kurpad S. Comparison between quantitative measurements of diffusion tensor imaging and T2 signal intensity in a large series of cervical spondylotic myelopathy patients for assessment of disease severity and prognostication of recovery. J Neurosurg Spine. 2019 Oct 01;31(4):473-479. |
54. Breu M, Reisinger D, Tao L, Wu D, Zhang Y, Budde MD, Fatemi A, Pathak AP, Zhang J. In vivo high-resolution diffusion tensor imaging of the developing neonatal rat cortex and its relationship to glial and dendritic maturation. Brain Struct Funct. 2019 Jun;224(5):1815-1829. PMCID: PMC6565480 |
55. Kaushal M, Shabani S, Budde M, Kurpad S. Diffusion Tensor Imaging in Acute Spinal Cord Injury: A Review of Animal and Human Studies. J Neurotrauma. 2019 Aug 01;36(15):2279-2286. |
56. Shabani S, Kaushal M, Budde M, Kurpad SN. Correlation of magnetic resonance diffusion tensor imaging parameters with American Spinal Injury Association score for prognostication and long-term outcomes. Neurosurg Focus. 2019 Mar 01;46(3):E2. |
57. Stemper BD, Shah AS, Budde MD, Chiariello R, Wilkins N, Olsen C, Mehta P, Kurpad SN, McCrea M, Pintar FA. Characterization of differing time-course of cognitive deficits and emotional changes following rotational traumatic brain injury in the rat 2015 IRCOBI Conference Proceedings - International Research Council on the Biomechanics of Injury. 2015:198-207. |
58. Wilkins N, Skinner NP, Motovylyak A, Schmit BD, Kurpad S, Budde MD. Evolution of Magnetic Resonance Imaging as Predictors and Correlates of Functional Outcome after Spinal Cord Contusion Injury in the Rat. J Neurotrauma. 2020 Mar 15;37(6):889-898. PMCID: PMC7071026 |
59. Koch KM, Bhave S, Kaushik SS, Nencka AS, Budde MD. Multispectral diffusion-weighted MRI of the instrumented cervical spinal cord: a preliminary study of 5 cases. Eur Spine J. 2020 May;29(5):1071-1077. PMCID: PMC7225051 |
60. Muftuler LT, Meier TB, Keith M, Budde MD, Huber DL, McCrea MA. Serial Diffusion Kurtosis Magnetic Resonance Imaging Study during Acute, Subacute, and Recovery Periods after Sport-Related Concussion. J Neurotrauma. 2020 Oct 01;37(19):2081-2092. PMCID: PMC8024361 |
61. Shabani S, Kaushal M, Budde MD, Wang MC, Kurpad SN. Diffusion tensor imaging in cervical spondylotic myelopathy: a review. J Neurosurg Spine. 2020 Jul 01;33(1):65-72. |
62. Brett BL, Koch KM, Muftuler LT, Budde M, McCrea MA, Meier TB. Association of Head Impact Exposure with White Matter Macrostructure and Microstructure Metrics. J Neurotrauma. 2021 Feb 15;38(4):474-484. PMCID: PMC7875606 |
63. Ibrahim EH, Baruah D, Budde M, Rubenstein J, Frei A, Schlaak R, Gore E, Bergom C. Optimized cardiac functional MRI of small-animal models of cancer radiation therapy. Magn Reson Imaging. 2020 Nov;73:130-137. PMCID: PMC7530081 |
64. Yon M, de Almeida Martins JP, Bao Q, Budde MD, Frydman L, Topgaard D. Diffusion tensor distribution imaging of an in vivo mouse brain at ultrahigh magnetic field by spatiotemporal encoding. NMR Biomed. 2020 Nov;33(11):e4355. PMCID: PMC7583469 |
65. Meyer BP, Hirschler L, Lee S, Kurpad SN, Warnking JM, Barbier EL, Budde MD. Optimized cervical spinal cord perfusion MRI after traumatic injury in the rat. J Cereb Blood Flow Metab. 2021 Aug;41(8):2010-2025. PMCID: PMC8327111 |
66. Lee S, Wilkins N, Schmit BD, Kurpad SN, Budde MD. Relationships between spinal cord blood flow measured with flow-sensitive alternating inversion recovery (FAIR) and neurobehavioral outcomes in rat spinal cord injury. Magn Reson Imaging. 2021 May;78:42-51. PMCID: PMC8501290 |
67. Lee SY, Meyer BP, Kurpad SN, Budde MD. Diffusion-prepared fast spin echo for artifact-free spinal cord imaging. Magn Reson Med. 2021 Aug;86(2):984-994. PMCID: PMC8369385 |
68. Shabani S, Meyer BP, Budde MD, Wang MC. Diagnostic Imaging in Spinal Cord Injury Neurosurgery Clinics of North America. 2021. |
69. Shabani S, Meyer BP, Budde MD, Wang MC. Diagnostic Imaging in Spinal Cord Injury. Neurosurg Clin N Am. 2021 Jul;32(3):323-331. |
70. Cohen-Adad J, Alonso-Ortiz E, Abramovic M, Arneitz C, Atcheson N, Barlow L, Barry RL, Barth M, Battiston M, Büchel C, Budde M, Callot V, Combes AJE, De Leener B, Descoteaux M, de Sousa PL, Dostál M, Doyon J, Dvorak A, Eippert F, Epperson KR, Epperson KS, Freund P, Finsterbusch J, Foias A, Fratini M, Fukunaga I, Gandini Wheeler-Kingshott CAM, Germani G, Gilbert G, Giove F, Gros C, Grussu F, Hagiwara A, Henry PG, Horák T, Hori M, Joers J, Kamiya K, Karbasforoushan H, Keřkovský M, Khatibi A, Kim JW, Kinany N, Kitzler HH, Kolind S, Kong Y, Kudlička P, Kuntke P, Kurniawan ND, Kusmia S, Labounek R, Laganà MM, Laule C, Law CS, Lenglet C, Leutritz T, Liu Y, Llufriu S, Mackey S, Martinez-Heras E, Mattera L, Nestrasil I, O'Grady KP, Papinutto N, Papp D, Pareto D, Parrish TB, Pichiecchio A, Prados F, Rovira À, Ruitenberg MJ, Samson RS, Savini G, Seif M, Seifert AC, Smith AK, Smith SA, Smith ZA, Solana E, Suzuki Y, Tackley G, Tinnermann A, Valošek J, Van De Ville D, Yiannakas MC, Weber Ii KA, Weiskopf N, Wise RG, Wyss PO, Xu J. Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers. Sci Data. 2021 Aug 16;8(1):219. PMCID: PMC8368310 |
71. Cohen-Adad J, Alonso-Ortiz E, Abramovic M, Arneitz C, Atcheson N, Barlow L, Barry RL, Barth M, Battiston M, Büchel C, Budde M, Callot V, Combes AJE, De Leener B, Descoteaux M, de Sousa PL, Dostál M, Doyon J, Dvorak A, Eippert F, Epperson KR, Epperson KS, Freund P, Finsterbusch J, Foias A, Fratini M, Fukunaga I, Wheeler-Kingshott CAMG, Germani G, Gilbert G, Giove F, Gros C, Grussu F, Hagiwara A, Henry PG, Horák T, Hori M, Joers J, Kamiya K, Karbasforoushan H, Keřkovský M, Khatibi A, Kim JW, Kinany N, Kitzler H, Kolind S, Kong Y, Kudlička P, Kuntke P, Kurniawan ND, Kusmia S, Labounek R, Laganà MM, Laule C, Law CS, Lenglet C, Leutritz T, Liu Y, Llufriu S, Mackey S, Martinez-Heras E, Mattera L, Nestrasil I, O'Grady KP, Papinutto N, Papp D, Pareto D, Parrish TB, Pichiecchio A, Prados F, Rovira À, Ruitenberg MJ, Samson RS, Savini G, Seif M, Seifert AC, Smith AK, Smith SA, Smith ZA, Solana E, Suzuki Y, Tackley G, Tinnermann A, Valošek J, Van De Ville D, Yiannakas MC, Weber KA 2nd, Weiskopf N, Wise RG, Wyss PO, Xu J. Generic acquisition protocol for quantitative MRI of the spinal cord. Nat Protoc. 2021 Oct;16(10):4611-4632. PMCID: PMC8811488 |
72. Murphy SA, Furger R, Kurpad SN, Arpinar VE, Nencka A, Koch K, Budde MD. Filtered Diffusion-Weighted MRI of the Human Cervical Spinal Cord: Feasibility and Application to Traumatic Spinal Cord Injury. AJNR Am J Neuroradiol. 2021 Nov;42(11):2101-2106. PMCID: PMC8583257 |
73. Stemper BD, Shah A, Chiariello R, McCarthy C, Jessen K, Sarka B, Seifert J, Budde MD, Wang K, Olsen CM, McCrea M. A Preclinical Rodent Model for Repetitive Subconcussive Head Impact Exposure in Contact Sport Athletes. Front Behav Neurosci. 2022;16:805124. PMCID: PMC8965565 |
74. Lasič S, Yuldasheva N, Szczepankiewicz F, Nilsson M, Budde M, Dall’Armellina E, Schneider JE, Teh I, Lundell H. Stay on the Beat With Tensor-Valued Encoding: Time-Dependent Diffusion and Cell Size Estimation in ex vivo Heart Frontiers in Physics. 25 March 2022;10. |
75. Muelbl MJ, Glaeser BL, Shah AS, Chiariello RA, Nawarawong NN, Stemper BD, Budde MD, Olsen CM. Repeated blast mild traumatic brain injury and oxycodone self-administration produce interactive effects on neuroimaging outcomes. Addict Biol. 2022 Mar;27(2):e13134. PMCID: PMC8896287 |
76. Rahman N, Xu K, Omer M, Budde MD, Brown A, Baron CA. Test-retest reproducibility of in vivo oscillating gradient and microscopic anisotropy diffusion MRI in mice at 9.4 Tesla. PLoS One. 2021;16(11):e0255711. PMCID: PMC8570471 |
77. Lee SY, Schmit BD, Kurpad SN, Budde MD. Acute Magnetic Resonance Imaging Predictors of Chronic Motor Function and Tissue Sparing in Rat Cervical Spinal Cord Injury. J Neurotrauma. 2022 Dec;39(23-24):1727-1740. PMCID: PMC9734017 |
78. Vedantam A, Purushothaman Y, Harinathan B, Scripp S, Budde MD, Yoganandan N. Spinal Cord Stress After Anterior Cervical Diskectomy and Fusion: Results from a Patient-Specific Finite Element Model. Ann Biomed Eng. 2023 May;51(5):1040-1051. |
79. Chiariello R, McCarthy C, Glaeser BL, Shah AS, Budde MD, Stemper BD, Olsen CM. Chronicity of repeated blast traumatic brain injury associated increase in oxycodone seeking in rats. Behav Brain Res. 2023 Feb 13;438:114181. PMCID: PMC9993345 |
80. Rosas Almanza J, Stehlik KE, Page JJ, Xiong SH, Tabor EG, Aperi B, Patel K, Kodali R, Kurpad S, Budde MD, Tarima S, Swartz K, Kroner A. IL-12p40 promotes secondary damage and functional impairment after spinal cord contusional injury. J Neurosci Res. 2022 Dec;100(12):2213-2231. |
81. Rahman N, Xu K, Budde MD, Brown A, Baron CA. A longitudinal microstructural MRI dataset in healthy C57Bl/6 mice at 9.4 Tesla. Sci Data. 2023 Feb 14;10(1):94. PMCID: PMC9929084 |
82. Lee S, Meyer BP, Hernandez-Garcia L, Kurpad SN, Schmit BD, Budde MD. Comparison and optimization of pCASL and VSASL for rat thoracolumbar spinal cord MRI at 9.4 T. Magn Reson Med. 2023 Jun;89(6):2305-2317. PMCID: PMC10050093 |
83. Meyer BP, Lee SY, Kurpad SN, Budde MD. Differential Trajectory of Diffusion and Perfusion Magnetic Resonance Imaging of Rat Spinal Cord Injury. J Neurotrauma. 2023 May;40(9-10):918-930. PMCID: PMC10150724 |
84. Vedantam A, Harinathan B, Warraich A, Budde MD, Yoganandan N. Differences in spinal cord biomechanics after laminectomy, laminoplasty, and laminectomy with fusion for degenerative cervical myelopathy. J Neurosurg Spine. 2023 Jul 01;39(1):28-39. |
85. Koch KM, Nencka AS, Klein A, Wang M, Kurpad S, Vedantam A, Budde M. Diffusion-weighted MRI of the spinal cord in cervical spondylotic myelopathy after instrumented fusion. Front Neurol. 2023;14:1172833. PMCID: PMC10236479 |
86. Nagree MS, Rybova J, Kleynerman A, Ahrenhoerster CJ, Saville JT, Xu T, Bachochin M, McKillop WM, Lawlor MW, Pshezhetsky AV, Isaeva O, Budde MD, Fuller M, Medin JA. Spinal muscular atrophy-like phenotype in a mouse model of acid ceramidase deficiency. Commun Biol. 2023 May 25;6(1):560. PMCID: PMC10212955 |
87. Vedantam A, Harinathan B, Purushothaman Y, Scripp S, Banerjee A, Warraich A, Budde MD, Yoganandan N. Determinants of spinal cord stress and strain in degenerative cervical myelopathy: a patient-specific finite element study Biomechanics and Modeling in Mechanobiology. 2023. |
88. Ahmed RU, Medina-Aguinaga D, Adams S, Knibbe CA, Morgan M, Gibson D, Kim Jw, Sharma M, Chopra M, Davison S, Sherwood LC, Negahdar MJ, Bert R, Ugiliweneza B, Hubscher C, Budde MD, Xu J, Boakye M. Predictive values of spinal cord diffusion magnetic resonance imaging to characterize outcomes after contusion injury Annals of Clinical and Translational Neurology. 2023. |
89. Singhal I, Harinathan B, Warraich A, Purushothaman Y, Budde MD, Yoganandan N, Vedantam A. Finite element modeling of the human cervical spinal cord and its applications: A systematic review. N Am Spine Soc J. 2023 Sep;15:100246. PMCID: PMC10448221 |
90. Ahmed RU, Medina-Aguinaga D, Adams S, Knibbe CA, Morgan M, Gibson D, Kim JW, Sharma M, Chopra M, Davison S, Sherwood LC, Negahdar MJ, Bert R, Ugiliweneza B, Hubscher C, Budde MD, Xu J, Boakye M. Predictive values of spinal cord diffusion magnetic resonance imaging to characterize outcomes after contusion injury. Ann Clin Transl Neurol. 2023 Sep;10(9):1647-1661. PMCID: PMC10502634 |
91. Vedantam A, Harinathan B, Purushothaman Y, Scripp S, Banerjee A, Warraich A, Budde MD, Yoganandan N. Determinants of spinal cord stress and strain in degenerative cervical myelopathy: a patient-specific finite element study. Biomech Model Mechanobiol. 2023 Dec;22(6):1789-1799. |
92. Everson CA, Szabo A, Plyer C, Hammeke TA, Stemper BD, Budde MD. Sleep loss, caffeine, sleep aids and sedation modify brain abnormalities of mild traumatic brain injury. Exp Neurol. 2024 Feb;372:114620. |
93. Zhou M, Stobbe R, Szczepankiewicz F, Budde M, Buck B, Kate M, Lloret M, Fairall P, Butcher K, Shuaib A, Emery D, Nilsson M, Westin CF, Beaulieu C. Tensor-valued diffusion MRI of human acute stroke Magnetic Resonance in Medicine. 2023. |
94. Lee S, Schmit BD, Kurpad SN, Budde MD. Cervical spinal cord angiography and vessel-selective perfusion imaging in the rat. NMR Biomed. 2024 Jun;37(6):e5115. PMCID: PMC11078600 |
95. Koch KM, Nencka AS, Kurpad S, Budde MD. Diffusion Weighted Magnetic Resonance Imaging of Spinal Cord Injuries After Instrumented Fusion Stabilization. J Neurotrauma. 2024 Sep;41(17-18):2125-2132. |
96. Zhou M, Stobbe R, Szczepankiewicz F, Budde M, Buck B, Kate M, Lloret M, Fairall P, Butcher K, Shuaib A, Emery D, Nilsson M, Westin CF, Beaulieu C. Tensor-valued diffusion MRI of human acute stroke. Magn Reson Med. 2024 May;91(5):2126-2141. |
97. Santini T, Shim A, Liou JJ, Rahman N, Varela-Mattatall G, Budde MD, Inoue W, Everling S, Baron CA. Investigating microstructural changes between in vivo and perfused ex vivo marmoset brains using oscillating gradient and b-tensor encoded diffusion MRI at 9.4 T. Magn Reson Med. 2025 Feb;93(2):788-802. PMCID: PMC11604852 |
98. Everson CA, Szabo A, Plyer C, Hammeke TA, Stemper BD, Budde MD. Subclinical brain manifestations of repeated mild traumatic brain injury are changed by chronic exposure to sleep loss, caffeine, and sleep aids. Exp Neurol. 2024 Nov;381:114928. |
99. Labounek R, Bondy MT, Paulson AL, Bédard S, Abramovic M, Alonso-Ortiz E, Atcheson NT, Barlow LR, Barry RL, Barth M, Battiston M, Büchel C, Budde MD, Callot V, Combes A, De Leener B, Descoteaux M, de Sousa PL, Dostál M, Doyon J, Dvorak AV, Eippert F, Epperson KR, Epperson KS, Freund P, Finsterbusch J, Foias A, Fratini M, Fukunaga I, Gandini Wheeler-Kingshott CAM, Germani G, Gilbert G, Giove F, Grussu F, Hagiwara A, Henry PG, Horák T, Hori M, Joers JM, Kamiya K, Karbasforoushan H, Keřkovský M, Khatibi A, Kim JW, Kinany N, Kitzler H, Kolind S, Kong Y, Kudlička P, Kuntke P, Kurniawan ND, Kusmia S, Laganà MM, Laule C, Law CSW, Leutritz T, Liu Y, Llufriu S, Mackey S, Martin AR, Martinez-Heras E, Mattera L, O'Grady KP, Papinutto N, Papp D, Pareto D, Parrish TB, Pichiecchio A, Prados F, Rovira À, Ruitenberg MJ, Samson RS, Savini G, Seif M, Seifert AC, Smith AK, Smith SA, Smith ZA, Solana E, Suzuki Y, Tackley GW, Tinnermann A, Valošek J, Van De Ville D, Yiannakas MC, Weber KA 2nd, Weiskopf N, Wise RG, Wyss PO, Xu J, Cohen-Adad J, Lenglet C, Nestrašil I. Body size interacts with the structure of the central nervous system: A multi-center in vivo neuroimaging study. bioRxiv. 2024 May 01. PMCID: PMC11092490 |
100. Budde MD, Frank JA. Magnetic tagging of therapeutic cells for MRI. J Nucl Med. 2009 Feb;50(2):171-4. PMCID: PMC2633027 |
Books, Chapters, and Reviews |
1. Budde MD, and Song SK. Insights into Diffusion Tensor Imaging from Animal Models of White Matter Pathology. In Diffusion MRI: Theory, Methods, and Applications. Derek K. Jones, editor. Oxford University Press. 2010. |
2. Budde MD., Frank JA. Focus on Molecular Imaging: Magnetic Tagging of Therapeutic Cells for MRI. J. Nuc Med. 2009; 50 (2). 171-4. |
3. Gammon ST, Foje N, Brewer EM, Owers E, Downs CA, Budde MD, Leevy WM, Helms MN. Preclinical anatomical, molecular, and functional imaging of the lung with multiple modalities. Am J Physiol Lung Cell Mol Physiol. 2014 May 15;306(10):L897-914. |
Abstracts |
1. Binzak, JM., Budde, MD., Robertson, DA., Gernsbacher, MA. Suppression of Irrelevant Meanings of Homographs. Poster presentation, Cognitive Neuroscience Society Annual Meeting. 2001 |
2. Prince, S., Budde, M., Daselaar, S., Dolcos, F., & Cabeza, R. Encoding and retrieval of semantic and perceptual word pair associations: A functional MRI study. Poster presentation, Cognitive Neuroscience Society Annual Meeting. 2003 |
3. Dolcos, F., Budde, M., LaBar, K., & Cabeza, R. Remembering one year later: Role of the amygdala in retrieving consolidated emotional memories. Poster presentation, Cognitive Neuroscience Society Annual Meeting. 2003 |
4. Daselaar, S. M., Prince, S.E., Dolcos, F., Nyberg, L., Budde, M., & Cabeza, R. Differentiating global and task-specific age effects on brain activity: A cross-function fMRI study. Poster presentation, Cognitive Neuroscience Society Annual Meeting. 2003 |
5. Budde, M., Prince, SE., Daselaar, SM., Greenberg, D., Rubin, D., LaBar, K., & Cabeza, R. A new method for investigating autobiographical memory in the fMRI environment. Poster presentation, Cognitive Neuroscience Society Annual Meeting. 2003 |
6. Cabeza, R., Prince, SE., Budde, M., Daselaar, SM., Greenberg, D., LaBar, K. & Rubin, D.. Comparing the neural correlates of autobiographical and laboratory memory with the new fMRI paradigm. Poster presentation, Soc. for Neuroscience Annual Meeting. 2003 |
7. Kim, JH., Budde, MD., Neil, JJ., Song, SK. Reproducibility of in Vivo DTI Mouse Spinal Cord. Poster presentation, Proc. Int. Soc. Magn Res Med. 2005 |
8. Budde, MD., Kim, JH., Klein, RS., Russell, JH., Cross, AH., Song, SK. Extensive axonal damage in the spinal cord of EAE mice detected with in vivo DTI. Oral presentation, Proc. Int. Soc. Magn Res Med. 2005 |
9. Budde, MD., Song, SK., Longitudinal Investigation of Axonal and Myelin Damage in the Spinal Cords of Mice with EAE Using In Vivo DTI. Oral Presentation, Soc. for Neuroscience Annual Meeting, Washington D.C. 2005 |
10. Budde, MD., Kim, JH., Liang, HF., Cross, AH., Song, SK. Axial diffusivity correlates with the degree of neurological disability in a mouse model of Multiple Sclerosis. Oral presentation, Proc. Int. Soc. Magn Res Med. 2006 |
11. Budde, MD., Kim, JH., Klein, RS., Russell, JH., Cross, AH., Song, SK. Toward Accurate Diagnosis of White Matter Pathology Using Diffusion Tensor Imaging. Oral presentation, Proc. Int. Soc. Magn Res Med. 2006 |
12. Budde, MD., Kim, JH., Xie, M., Liang, HF., Cross, AH., Song, SK. Decreased axial diffusivity as a biomarker of axonal injury in the spinal cord white matter of mice with EAE validated with immunofluorescence. Poster presentation, Proc. Int. Soc. Magn Res Med. 2007 |
13. Benzinger, TL., Liang, HS., Budde, MD., Sun, S., Cross DA., Schmidt, R., Song, SK. Axial and Radial Diffusivity as MR Biomarkers of Axonal and Myelin Injury in Ex-Vivo Cervical Spinal Cord from Multiple Sclerosis Patients. Oral presentation, Proc. Int. Soc. Magn Res Med. 2007 |
14. Haldar JP, Hernando D, Budde MD, Wang Q, Song SK, Liang ZP. High-resolution MR metabolic imaging. Conf Proc IEEE Eng Med Biol Soc. 2007:4324-6. |
15. Budde, MD., Song, SK. Relating spinal cord axonal damage and neurological impairment in EAE using in vivo DTI. Poster presentation, Bi-annual Minnesota Workshops on High Field MR Imaging and Spectroscopy. Minneapolis. 2007 |
16. Budde, MD., Song, SK. Noninvasive detection of axonal damage: Spinal cord MRI in a mouse model of Multiple Sclerosis. Poster presentation, at NIH Graduate Student Research Festival. 2007 |
17. Budde, MD., Song, SK. Focal lesions do not cause neurological impairment in EAE: Correlating histology with in vivo DTI. Poster presentation, Proc. Int. Soc. Magn Res Med. 2008 |
18. Budde, MD., Jordan, EK., Smith, M., Gold, E., Frank, JA. BOLD changes in the microenvironment are an early marker of micrometastatic breast cancer in the rat brain. Poster presentation, Proc. Int. Soc. Magn Res Med. 2009 |
19. Xie, M., Budde, MD., Chen, CI., Trinkaus, K., Armstrong, RC., Cross, AH., Song, SK. Pathological Correlates of the Decreased Axial Diffusivity in White Matter Injury. Oral presentation, Proc. Int. Soc. Magn Res Med. 2009 |
20. Budde MD, Resnick M, Gold E, Jordan EK, Frank JA. Microscopic Morphology of Brain and Bone Metastases in a Rat Breast Cancer Model by Diffusion MRI. Oral presentation, Proc. Int. Soc. Magn Res Med. 2010 |
21. Budde MD, Gold E, Jordan EK, Smith M, Frank JA. Hypoxia Detected with Phase Contrast MRI is an Early Event in Micrometastatic Breast Cancer Development in the Rat Brain. Oral presentation, Proc. Int. Soc. Magn Res Med. 2010 |
22. Budde MD, Janes LA, Gold E, Turtzo LC, Frank JA. Microscopic Determinates of Anisotropy in the Injured Rat Brain using Fourier Analysis of Histological Sections. Oral presentation, Proc. Int. Soc. Magn Res Med. 2011 |
23. Shefchik DS., Jesmanowicz A., Budde MD., Nencka AS. Single-Coil Two-Fold Accelerated Spin-Echo Phase-SENSE Imaging of the Rodent Brain at 9.4T. Proceedings of the International Society for Magnetic Resonance in Medicine 2012. 2229. |
24. Budde MD. Structure Tensor Analysis of Histological Images to Examine Brain Microstructure. Proceedings of the International Society for Magnetic Resonance in Medicine 2012. p0458 |
25. Budde MD., Turtzo, LC., Gold E., Janes L., Lewis B., Frank JA. Dynamic Contrast Enhanced MRI to Detect Vascular Injury in a Rat Model of Traumatic Brain Injury. Proceedings of the International Society for Magnetic Resonance in Medicine 2012. p0921. |
26. Budde MD., Shah A., Pintar F., Stemper B. Diffusion Tensor Imaging of the Brain in Rats Exposed to Primary Blast. Poster Presentation at the National Neurotrauma Society Annual Meeting 2012. D54.
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27. Budde MD., Shah A., Pintar F., Stemper B. Detection of Brain Injury in a Rotation Acceleration Model of Mild Traumatic Brain Injury Using Diffusion Tensor Imaging. Poster Presentation at the National Neurotrauma Society Annual Meeting 2012. D54. |
28. M. E. Komlosh, M. D. Budde, L. Holtzclaw, M. Lizak, P. J. Basser. Detection of beaded nerve fibers using d-PFG MRI. 11th International Bologna Conference on Magnetic Resonance in Porous Media.
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29. Budde MD, Shah A, Pintar F, Stemper BD. Diffusion Tensor Imaging of the Brain in Rats Exposed to Primary Blast. Poster Presentation at the Society for Neuroscience Annual Meeting 2012
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30. Budde, MD & Skinner N. Simulating the dPFG and qMAS in a Model of Acute Axonal Injury. Poster Presentation at the International Society for Magnetic Resonance in Medicine Annual Meeting 2015
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31. Skinner N. & Budde, MD. Microscopic anisotropy in the fixed spinal cord from dPFG and qMAS diffusion weighted imaging compared to DTI. Poster Presentation at the International Society for Magnetic Resonance in Medicine Annual Meeting 2015 |
32. Zakszewski E, Skinner N, Kurpad S, Schmit B, & Budde M. Non-Gaussian Diffusion in the Rat Spinal Cord In Vivo with Phase and Susceptibility Corrected Segmented EPI. Poster Presentation at the International Society for Magnetic Resonance in Medicine Annual Meeting. 2015 |
33. Skinner N, Schmit B, Kurpad S, & Budde M. Rapid in-vivo detection of spinal cord injury severity with advanced diffusion magnetic resonance spectroscopy. Oral Presentation at the Society for Neuroscience Annual Meeting. 2015 |
