Medical College of Wisconsin
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Colbie J. Reed PhD

Postdoctoral Researcher 1

Institution: Medical College of Wisconsin
Department: Data Science Institute
Division: Data Science Institute
Program: General Operations

Member of the Data Science Institute

Publications (8)

  • Alternate routes to mnm5s2U synthesis in Gram-positive bacteria. (Jaroch M, Sun G, Tsui H-CT, Reed C, Sun J, Jörg M, Winkler ME, Rice KC, Dziergowska A, Stich TA, Dedon PC, Dos Santos PC, de Crécy-Lagard V) J Bacteriol 2024 Apr 18;206(4):e0045223 PMID: 38551342 PMCID: PMC11025329 SCOPUS ID: 2-s2.0-85190902750 03/29/2024    
  • Mapping the tRNA modification landscape of Bartonella henselae Houston I and Bartonella quintana Toulouse. (Quaiyum S, Sun J, Marchand V, Sun G, Reed CJ, Motorin Y, Dedon PC, Minnick MF, de Crécy-Lagard V) Front Microbiol 2024;15:1369018 PMID: 38544857 PMCID: PMC10965804 SCOPUS ID: 2-s2.0-85188559222 03/28/2024       2 Citations
  • Beyond blast: enabling microbiologists to better extract literature, taxonomic distributions and gene neighbourhood information for protein families. (Reed CJ, Denise R, Hourihan J, Babor J, Jaroch M, Martinelli M, Hutinet G, de Crécy-Lagard V) Microb Genom 2024 Feb;10(2) PMID: 38323604 PMCID: PMC10926702 SCOPUS ID: 2-s2.0-85184531011 02/07/2024       1 Citation
  • Mapping the tRNA Modification Landscape of Bartonella henselae Houston I and Bartonella quintana Toulouse. (Quaiyum S, Sun J, Marchand V, Sun G, Reed CJ, Motorin Y, Dedon PC, Minnick MF, de Crécy-Lagard V) bioRxiv 2024 Jan 09 PMID: 38260440 PMCID: PMC10802484 01/23/2024    
  • Beyond Blast: Enabling Microbiologists to Better Extract Literature, Taxonomic Distributions and Gene Neighborhood Information for Protein Families. (Reed CJ, Denise R, Hourihan J, Babor J, Jaroch M, Martinelli M, Hutinet G, de Crécy-Lagard V) bioRxiv 2024 Jan 02 PMID: 37205517 PMCID: PMC10187207 05/19/2023    
  • Evolutionary Diversity of Dus2 Enzymes Reveals Novel Structural and Functional Features among Members of the RNA Dihydrouridine Synthases Family. (Lombard M, Reed CJ, Pecqueur L, Faivre B, Toubdji S, Sudol C, Brégeon D, de Crécy-Lagard V, Hamdane D) Biomolecules 2022 Nov 26;12(12) PMID: 36551188 PMCID: PMC9775027 SCOPUS ID: 2-s2.0-85144651048 12/24/2022       5 Citations
  • A roadmap for the functional annotation of protein families: a community perspective. (de Crécy-Lagard V, Amorin de Hegedus R, Arighi C, Babor J, Bateman A, Blaby I, Blaby-Haas C, Bridge AJ, Burley SK, Cleveland S, Colwell LJ, Conesa A, Dallago C, Danchin A, de Waard A, Deutschbauer A, Dias R, Ding Y, Fang G, Friedberg I, Gerlt J, Goldford J, Gorelik M, Gyori BM, Henry C, Hutinet G, Jaroch M, Karp PD, Kondratova L, Lu Z, Marchler-Bauer A, Martin MJ, McWhite C, Moghe GD, Monaghan P, Morgat A, Mungall CJ, Natale DA, Nelson WC, O'Donoghue S, Orengo C, O'Toole KH, Radivojac P, Reed C, Roberts RJ, Rodionov D, Rodionova IA, Rudolf JD, Saleh L, Sheynkman G, Thibaud-Nissen F, Thomas PD, Uetz P, Vallenet D, Carter EW, Weigele PR, Wood V, Wood-Charlson EM, Xu J) Database (Oxford) 2022 Aug 12;2022 PMID: 35961013 PMCID: PMC9374478 SCOPUS ID: 2-s2.0-85136340733 08/13/2022       25 Citations
  • Comparative Genomic Analysis of the DUF34 Protein Family Suggests Role as a Metal Ion Chaperone or Insertase. (Reed CJ, Hutinet G, de Crécy-Lagard V) Biomolecules 2021 Aug 27;11(9) PMID: 34572495 PMCID: PMC8469502 SCOPUS ID: 2-s2.0-85113515247 09/29/2021       6 Citations
    • Last update: 04/28/2025