Mahima Vedi
Research Areas of Interest
Computational BiologyGene OntologyGenomicsModels, GeneticPublications (20)
The Rat Genome Database: Genetic, Genomic, and Phenotypic Data Across Multiple Species. (Laulederkind SJF, Hayman GT, Wang SJ, Kaldunski ML, Vedi M, Demos WM, Tutaj M, Smith JR, Lamers L, Gibson AC, Thorat K, Thota J, Tutaj MA, de Pons JL, Dwinell MR, Kwitek AE) Curr Protoc 2023 Jun;3(6):e804 PMID: 37347557 PMCID: PMC10335880 SCOPUS ID: 2-s2.0-85162756259 06/22/2023 Rare disease research resources at the Rat Genome Database. (Kaldunski ML, Smith JR, Brodie KC, De Pons JL, Demos WM, Gibson AC, Hayman GT, Lamers L, Laulederkind SJF, Thorat K, Thota J, Tutaj MA, Tutaj M, Vedi M, Wang SJ, Zacher S, Dwinell MR, Kwitek AE) Genetics 2023 Aug 09;224(4) PMID: 37119810 PMCID: PMC10411567 SCOPUS ID: 2-s2.0-85167481442 04/30/2023 3 Citations2022 updates to the Rat Genome Database: a Findable, Accessible, Interoperable, and Reusable (FAIR) resource. (Vedi M, Smith JR, Thomas Hayman G, Tutaj M, Brodie KC, De Pons JL, Demos WM, Gibson AC, Kaldunski ML, Lamers L, Laulederkind SJF, Thota J, Thorat K, Tutaj MA, Wang SJ, Zacher S, Dwinell MR, Kwitek AE) Genetics 2023 May 04;224(1) PMID: 36930729 PMCID: PMC10474928 SCOPUS ID: 2-s2.0-85159551813 03/18/2023 11 CitationsThe Gene Ontology knowledgebase in 2023. (Gene Ontology Consortium, Aleksander SA, Balhoff J, Carbon S, Cherry JM, Drabkin HJ, Ebert D, Feuermann M, Gaudet P, Harris NL, Hill DP, Lee R, Mi H, Moxon S, Mungall CJ, Muruganugan A, Mushayahama T, Sternberg PW, Thomas PD, Van Auken K, Ramsey J, Siegele DA, Chisholm RL, Fey P, Aspromonte MC, Nugnes MV, Quaglia F, Tosatto S, Giglio M, Nadendla S, Antonazzo G, Attrill H, Dos Santos G, Marygold S, Strelets V, Tabone CJ, Thurmond J, Zhou P, Ahmed SH, Asanitthong P, Luna Buitrago D, Erdol MN, Gage MC, Ali Kadhum M, Li KYC, Long M, Michalak A, Pesala A, Pritazahra A, Saverimuttu SCC, Su R, Thurlow KE, Lovering RC, Logie C, Oliferenko S, Blake J, Christie K, Corbani L, Dolan ME, Drabkin HJ, Hill DP, Ni L, Sitnikov D, Smith C, Cuzick A, Seager J, Cooper L, Elser J, Jaiswal P, Gupta P, Jaiswal P, Naithani S, Lera-Ramirez M, Rutherford K, Wood V, De Pons JL, Dwinell MR, Hayman GT, Kaldunski ML, Kwitek AE, Laulederkind SJF, Tutaj MA, Vedi M, Wang SJ, D'Eustachio P, Aimo L, Axelsen K, Bridge A, Hyka-Nouspikel N, Morgat A, Aleksander SA, Cherry JM, Engel SR, Karra K, Miyasato SR, Nash RS, Skrzypek MS, Weng S, Wong ED, Bakker E, Berardini TZ, Reiser L, Auchincloss A, Axelsen K, Argoud-Puy G, Blatter MC, Boutet E, Breuza L, Bridge A, Casals-Casas C, Coudert E, Estreicher A, Livia Famiglietti M, Feuermann M, Gos A, Gruaz-Gumowski N, Hulo C, Hyka-Nouspikel N, Jungo F, Le Mercier P, Lieberherr D, Masson P, Morgat A, Pedruzzi I, Pourcel L, Poux S, Rivoire C, Sundaram S, Bateman A, Bowler-Barnett E, Bye-A-Jee H, Denny P, Ignatchenko A, Ishtiaq R, Lock A, Lussi Y, Magrane M, Martin MJ, Orchard S, Raposo P, Speretta E, Tyagi N, Warner K, Zaru R, Diehl AD, Lee R, Chan J, Diamantakis S, Raciti D, Zarowiecki M, Fisher M, James-Zorn C, Ponferrada V, Zorn A, Ramachandran S, Ruzicka L, Westerfield M) Genetics 2023 May 04;224(1) PMID: 36866529 PMCID: PMC10158837 SCOPUS ID: 2-s2.0-85164785564 03/04/2023 520 CitationsOntological Analysis of Coronavirus Associated Human Genes at the COVID-19 Disease Portal. (Wang SJ, Brodie KC, De Pons JL, Demos WM, Gibson AC, Hayman GT, Hill ML, Kaldunski ML, Lamers L, Laulederkind SJF, Nalabolu HS, Thota J, Thorat K, Tutaj MA, Tutaj M, Vedi M, Zacher S, Smith JR, Dwinell MR, Kwitek AE) Genes (Basel) 2022 Dec 07;13(12) PMID: 36553571 PMCID: PMC9777590 SCOPUS ID: 2-s2.0-85144670256 12/24/2022 1 CitationMOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses. (Vedi M, Nalabolu HS, Lin CW, Hoffman MJ, Smith JR, Brodie K, De Pons JL, Demos WM, Gibson AC, Hayman GT, Hill ML, Kaldunski ML, Lamers L, Laulederkind SJF, Thorat K, Thota J, Tutaj M, Tutaj MA, Wang SJ, Zacher S, Dwinell MR, Kwitek AE) Genetics 2022 Apr 04;220(4) PMID: 35380657 PMCID: PMC8982048 SCOPUS ID: 2-s2.0-85128160560 04/06/2022 7 CitationsThe Rat Genome Database (RGD) facilitates genomic and phenotypic data integration across multiple species for biomedical research. (Kaldunski ML, Smith JR, Hayman GT, Brodie K, De Pons JL, Demos WM, Gibson AC, Hill ML, Hoffman MJ, Lamers L, Laulederkind SJF, Nalabolu HS, Thorat K, Thota J, Tutaj M, Tutaj MA, Vedi M, Wang SJ, Zacher S, Dwinell MR, Kwitek AE) Mamm Genome 2022 Mar;33(1):66-80 PMID: 34741192 PMCID: PMC8570235 SCOPUS ID: 2-s2.0-85118526605 11/07/2021 12 CitationsThe Gene Ontology resource: enriching a GOld mine. (Gene Ontology Consortium) Nucleic Acids Res 2021 Jan 08;49(D1):D325-D334 PMID: 33290552 PMCID: PMC7779012 SCOPUS ID: 2-s2.0-85099428896 12/09/2020 2083 CitationsAssessment of hepatoprotective and nephroprotective potential of withaferin A on bromobenzene-induced injury in Swiss albino mice: possible involvement of mitochondrial dysfunction and inflammation. (Vedi M, Sabina EP) Cell Biol Toxicol 2016 Oct;32(5):373-90 PMID: 27250656 SCOPUS ID: 2-s2.0-84973165876 06/03/2016 38 CitationsAttenuation of the toxic effects of bromobenzene on the kidneys in Wistar albino rats by the blue green algae Spirulina fusiformis (Vedi M, Martin SJ, Lavinya BU, Bhattacharya Y, Swaminathan M, Tandon S, Rasool M, Sabina EP) Journal of the Indian Chemical Society April 2015;92(4):509-513 SCOPUS ID: 2-s2.0-85063219874 04/01/2015 Mitigation of biochemical and histological effects of bromobenzene on the hepatic system in rats by the Indian herbal drug formulation Triphala (Lavinya BU, Vedi M, Martin SJ, Srilekha N, Kumar BS, Rasool M, Sabinia EP) Journal of the Indian Chemical Society 2015;92(4):566-569 SCOPUS ID: 2-s2.0-85063191033 01/01/2015 1 CitationAmelioration of bromobenzene hepatotoxicity by Withania somnifera pretreatment: Role of mitochondrial oxidative stress. (Vedi M, Rasool M, Sabina EP) Toxicol Rep 2014;1:629-638 PMID: 28962276 PMCID: PMC5598216 SCOPUS ID: 2-s2.0-84922931416 08/27/2014 26 CitationsAttenuation of anti-tuberculosis therapy induced hepatotoxicity by Spirulina fusiformis, a candidate food supplement. (Martin SJ, Baskaran UL, Vedi M, Sabina EP) Toxicol Mech Methods 2014 Dec;24(8):584-92 PMID: 25137345 SCOPUS ID: 2-s2.0-84910041091 08/20/2014 19 CitationsProtective effect of administration of Withania somifera against bromobenzene induced nephrotoxicity and mitochondrial oxidative stress in rats. (Vedi M, Rasool M, Sabina EP) Ren Fail 2014 Aug;36(7):1095-103 PMID: 24845808 SCOPUS ID: 2-s2.0-84904641129 05/23/2014 13 CitationsAnalgesic, antipyretic and ulcerogenic effects of piperine: An active ingredient of pepper (Sabina EP, Nasreen A, Vedi M, Rasool M) Journal of Pharmaceutical Sciences and Research October 2013;5(10):203-206 SCOPUS ID: 2-s2.0-84891699323 10/01/2013 24 CitationsProtective effects of blue green algae Spirulina fusiformis against galactosamine-induced hepatotoxicity in mice (Vedi M, Kalaiselvan S, Rasool M, Sabina EP) Asian Journal of Pharmaceutical and Clinical Research August 2013;6(SUPPL.3):150-154 SCOPUS ID: 2-s2.0-84883324987 08/01/2013 8 CitationsAmeliorative effect of piperine from piper nigrum on D-galactosamine-induced hepatotoxicity in mice (Sabina EP, Vedi M, Rasool M, Murugan K, Jackline D) International Journal of Pharmaceutical Sciences Review and Research July 2013;21(2):240-245 SCOPUS ID: 2-s2.0-84881537915 07/01/2013 5 CitationsHepatoprotective and antioxidant potential of Withania somnifera against Paracetamol-induced liver damage in rats (Sabina EP, Rasool M, Vedi M, Navaneethan D, Ravichander M, Sarah P, Parthasarathy RT) International Journal of Pharmacy and Pharmaceutical Sciences 2013;5(SUPPL. 2):648-651 SCOPUS ID: 2-s2.0-84878470524 06/06/2013 21 CitationsProtective properties of traditional herbal formulation triphala against D-Galactosamine induced hepatotoxicity in mice (Sabina EP, Rasool M, Vedi M, Geethanjali A) International Journal of Drug Development and Research April 2013;5(2):164-173 SCOPUS ID: 2-s2.0-84880055237 04/01/2013 1 CitationEvaluation of pharmacological activities of traditional herbal drug Ocimum sanctum in rats (Vedi M, Loganathan B, Chandrasekar G, Vinayagam S, Verma K, Rasool M, Sabina EP) International Journal of Research in Pharmaceutical Sciences 2013;4(3):411-414 SCOPUS ID: 2-s2.0-84897531599 01/01/2013 Last update: 08/24/2023