Medical College of Wisconsin
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William R. Hogan MD

William R. Hogan MD profile photo picture

Director, Professor

Institution: Medical College of Wisconsin
Department: Data Science Institute
Division: Data Science Institute
Program: General Operations

image of /images/ORCIDiD_icon16x16.png   https://orcid.org/0000-0002-9881-1017

Member of the Cancer Center


I am willing to collaborate on research projects.
I am willing to be a peer mentor.
I am willing to mentor a junior faculty member.


Research Areas of Interest

  • Biological Ontologies
  • Biosurveillance
  • Electronic Health Records
  • Population Surveillance
  • Public Health Surveillance
  • Systematized Nomenclature of Medicine
  • Terminology
  • Publications (161)

  • Initial Antihypertensive Prescribing in Relation to Blood Pressure Among Florida Medicaid and Medicare Recipients in the OneFlorida+ Research Consortium. (Smith KM, Keshwani S, Walsh MG, Winterstein AG, Gurka MJ, Libby A, Hogan WR, Pepine CJ, Cooper-DeHoff RM, Smith SM) Hypertension 2024 Feb;81(2):e7-e9 PMID: 38232142 PMCID: PMC10795723 SCOPUS ID: 2-s2.0-85182796232 01/17/2024    
  • A study of generative large language model for medical research and healthcare. (Peng C, Yang X, Chen A, Smith KE, PourNejatian N, Costa AB, Martin C, Flores MG, Zhang Y, Magoc T, Lipori G, Mitchell DA, Ospina NS, Ahmed MM, Hogan WR, Shenkman EA, Guo Y, Bian J, Wu Y) NPJ Digit Med 2023 Nov 16;6(1):210 PMID: 37973919 PMCID: PMC10654385 SCOPUS ID: 2-s2.0-85177043166 11/17/2023       1 Citation
  • Avenues for Strengthening PCORnet's Capacity to Advance Patient-Centered Economic Outcomes in Patient-Centered Outcomes Research (PCOR). (Waitman LR, Bailey LC, Becich MJ, Chung-Bridges K, Dusetzina SB, Espino JU, Hogan WR, Kaushal R, McClay JC, Merritt JG, Rothman RL, Shenkman EA, Song X, Nauman E) Med Care 2023 Dec 01;61(12 Suppl 2):S153-S160 PMID: 37963035 PMCID: PMC10635342 SCOPUS ID: 2-s2.0-85177102847 11/14/2023       1 Citation
  • Ontology of language, with applications to demographic data (Clint Dowland S, Smith B, Diller MA, Landgrebe J, Hogan WR) Applied Ontology 7 November 2023;18(3):239-262 SCOPUS ID: 2-s2.0-85177032417 11/07/2023    
  • An Automated Workflow Composition System for Liquid Chromatography-Mass Spectrometry Metabolomics Data Processing. (Du X, Dastmalchi F, Diller MA, Brochhausen M, Garrett TJ, Hogan WR, Lemas DJ) J Am Soc Mass Spectrom 2023 Dec 06;34(12):2857-2863 PMID: 37874901 SCOPUS ID: 2-s2.0-85177819207 10/24/2023    
  • Improving the Quality and Utility of Electronic Health Record Data through Ontologies. (Lin AY, Arabandi S, Beale T, Duncan WD, Hicks A, Hogan WR, Jensen M, Koppel R, Martínez-Costa C, Nytrø Ø, Obeid JS, de Oliveira JP, Ruttenberg A, Seppälä S, Smith B, Soergel D, Zheng J, Schulz S) Standards (Basel) 2023 Sep;3(3):316-340 PMID: 37873508 PMCID: PMC10591519 10/24/2023    
  • The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records. (Li P, Lyu T, Alkhuzam K, Spector E, Donahoo WT, Bost S, Wu Y, Hogan WR, Prosperi M, Schatz DA, Atkinson MA, Haller MJ, Shenkman EA, Guo Y, Bian J, Shao H) J Am Med Inform Assoc 2023 Dec 22;31(1):165-173 PMID: 37812771 PMCID: PMC10746308 SCOPUS ID: 2-s2.0-85181177559 10/09/2023    
  • Characteristics and Predictors of Apparent Treatment-Resistant Hypertension in Real-World Populations Using Electronic Health Record-Based Data. (Jafari E, Cooper-DeHoff RM, Effron MB, Hogan WR, McDonough CW) Am J Hypertens 2024 Jan 01;37(1):60-68 PMID: 37712350 PMCID: PMC10724527 SCOPUS ID: 2-s2.0-85180004382 09/15/2023    
  • Improving the Quality and Utility of Electronic Health Record Data through Ontologies (A.Y. Lin, S. Arabandi, T. Beale, W.D. Duncan, A. Hicks, W.R. Hogan, M. Jensen, R. Koppel, C. Martínez-Costa, Ø. Nytrø, J.S. Obeid, J.P. de Oliveira, A. Ruttenberg, S. Seppälä, B. Smith, D. Soergel, J. Zheng, S. Schulz) Standards 09/15/2023    
  • Clinical concept and relation extraction using prompt-based machine reading comprehension. (Peng C, Yang X, Yu Z, Bian J, Hogan WR, Wu Y) J Am Med Inform Assoc 2023 Aug 18;30(9):1486-1493 PMID: 37316988 PMCID: PMC10436141 SCOPUS ID: 2-s2.0-85168247821 06/15/2023       1 Citation
  • Characteristics and Predictors of Apparent Treatment Resistant Hypertension in Real-World Populations Using Electronic Health Record-Based Data. (Jafari E, Cooper-DeHoff RM, Effron MB, Hogan WR, McDonough CW) medRxiv 2023 May 01 PMID: 37205447 PMCID: PMC10187337 05/19/2023    
  • Impacts of Eligibility Criteria on Trial Participants' Age in Alzheimer's Disease Clinical Trials. (Chen A, Li Q, He X, Jaffee MS, Hogan WR, Wang F, Guo Y, Bian J) AMIA Annu Symp Proc 2022;2022:368-376 PMID: 37128470 PMCID: PMC10148327 05/02/2023    
  • Evaluating LC-HRMS metabolomics data processing software using FAIR principles for research software. (Du X, Dastmalchi F, Ye H, Garrett TJ, Diller MA, Liu M, Hogan WR, Brochhausen M, Lemas DJ) Metabolomics 2023 Feb 06;19(2):11 PMID: 36745241 SCOPUS ID: 2-s2.0-85147508144 02/07/2023       4 Citations
  • Overtriage, Undertriage, and Value of Care after Major Surgery: An Automated, Explainable Deep Learning-Enabled Classification System. (Loftus TJ, Ruppert MM, Shickel B, Ozrazgat-Baslanti T, Balch JA, Hu D, Javed A, Madbak F, Skarupa DJ, Guirgis F, Efron PA, Tighe PJ, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A) J Am Coll Surg 2023 Feb 01;236(2):279-291 PMID: 36648256 PMCID: PMC9993068 SCOPUS ID: 2-s2.0-85146484769 01/18/2023       2 Citations
  • Uncertainty-aware deep learning in healthcare: A scoping review. (Loftus TJ, Shickel B, Ruppert MM, Balch JA, Ozrazgat-Baslanti T, Tighe PJ, Efron PA, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A) PLOS Digit Health 2022;1(8) PMID: 36590140 PMCID: PMC9802673 01/03/2023    
  • A large language model for electronic health records. (Yang X, Chen A, PourNejatian N, Shin HC, Smith KE, Parisien C, Compas C, Martin C, Costa AB, Flores MG, Zhang Y, Magoc T, Harle CA, Lipori G, Mitchell DA, Hogan WR, Shenkman EA, Bian J, Wu Y) NPJ Digit Med 2022 Dec 26;5(1):194 PMID: 36572766 PMCID: PMC9792464 SCOPUS ID: 2-s2.0-85145190430 12/27/2022       83 Citations
  • Initial Antihypertensive Regimens in Newly Treated Patients: Real World Evidence From the OneFlorida+ Clinical Research Network. (Smith SM, Winterstein AG, Gurka MJ, Walsh MG, Keshwani S, Libby AM, Hogan WR, Pepine CJ, Cooper-DeHoff RM) J Am Heart Assoc 2023 Jan 03;12(1):e026652 PMID: 36565195 PMCID: PMC9973585 SCOPUS ID: 2-s2.0-85145492536 12/25/2022       1 Citation
  • Ideal algorithms in healthcare: Explainable, dynamic, precise, autonomous, fair, and reproducible. (Loftus TJ, Tighe PJ, Ozrazgat-Baslanti T, Davis JP, Ruppert MM, Ren Y, Shickel B, Kamaleswaran R, Hogan WR, Moorman JR, Upchurch GR Jr, Rashidi P, Bihorac A) PLOS Digit Health 2022;1(1) PMID: 36532301 PMCID: PMC9754299 12/20/2022    
  • Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies. (Matentzoglu N, Goutte-Gattat D, Tan SZK, Balhoff JP, Carbon S, Caron AR, Duncan WD, Flack JE, Haendel M, Harris NL, Hogan WR, Hoyt CT, Jackson RC, Kim H, Kir H, Larralde M, McMurry JA, Overton JA, Peters B, Pilgrim C, Stefancsik R, Robb SM, Toro S, Vasilevsky NA, Walls R, Mungall CJ, Osumi-Sutherland D) Database (Oxford) 2022 Oct 08;2022 PMID: 36208225 PMCID: PMC9547537 SCOPUS ID: 2-s2.0-85139571384 10/09/2022       14 Citations
  • An Overview of Cancer in the First 315,000 All of Us Participants. (Aschebrook-Kilfoy B, Zakin P, Craver A, Shah S, Kibriya MG, Stepniak E, Ramirez A, Clark C, Cohn E, Ohno-Machado L, Cicek M, Boerwinkle E, Schully SD, Mockrin S, Gebo K, Mayo K, Ratsimbazafy F, Sanders A, Shah RC, Argos M, Ho J, Kim K, Daviglus M, Greenland P, Ahsan H, All of Us Research Program Investigators) PLoS One 2022;17(9):e0272522 PMID: 36048778 PMCID: PMC9436122 SCOPUS ID: 2-s2.0-85137139058 09/02/2022       6 Citations
  • The All of Us Research Program: Data quality, utility, and diversity. (Ramirez AH, Sulieman L, Schlueter DJ, Halvorson A, Qian J, Ratsimbazafy F, Loperena R, Mayo K, Basford M, Deflaux N, Muthuraman KN, Natarajan K, Kho A, Xu H, Wilkins C, Anton-Culver H, Boerwinkle E, Cicek M, Clark CR, Cohn E, Ohno-Machado L, Schully SD, Ahmedani BK, Argos M, Cronin RM, O'Donnell C, Fouad M, Goldstein DB, Greenland P, Hebbring SJ, Karlson EW, Khatri P, Korf B, Smoller JW, Sodeke S, Wilbanks J, Hentges J, Mockrin S, Lunt C, Devaney SA, Gebo K, Denny JC, Carroll RJ, Glazer D, Harris PA, Hripcsak G, Philippakis A, Roden DM, All of Us Research Program) Patterns (N Y) 2022 Aug 12;3(8):100570 PMID: 36033590 PMCID: PMC9403360 SCOPUS ID: 2-s2.0-85135943979 08/30/2022       37 Citations
  • Phenotype clustering in health care: A narrative review for clinicians. (Loftus TJ, Shickel B, Balch JA, Tighe PJ, Abbott KL, Fazzone B, Anderson EM, Rozowsky J, Ozrazgat-Baslanti T, Ren Y, Berceli SA, Hogan WR, Efron PA, Moorman JR, Rashidi P, Upchurch GR Jr, Bihorac A) Front Artif Intell 2022;5:842306 PMID: 36034597 PMCID: PMC9411746 SCOPUS ID: 2-s2.0-85136715038 08/30/2022       19 Citations
  • A scoping review of semantic integration of health data and information. (Zhang H, Lyu T, Yin P, Bost S, He X, Guo Y, Prosperi M, Hogan WR, Bian J) Int J Med Inform 2022 Sep;165:104834 PMID: 35863206 SCOPUS ID: 2-s2.0-85134625364 07/22/2022       1 Citation
  • Postoperative Overtriage to an Intensive Care Unit Is Associated With Low Value of Care. (Loftus TJ, Ruppert MM, Ozrazgat-Baslanti T, Balch JA, Shickel B, Hu D, Efron PA, Tighe PJ, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A) Ann Surg 2023 Feb 01;277(2):179-185 PMID: 35797553 PMCID: PMC9817331 SCOPUS ID: 2-s2.0-85146183801 07/08/2022       5 Citations
  • Integration of Biobanking Architecture with Genomics Data: Genomics Integrated Biobanking Ontology (GIBO). (Singh N, Braun N, Hogan W, Brochhausen M) Stud Health Technol Inform 2022 Jun 29;295:302-303 PMID: 35773868 SCOPUS ID: 2-s2.0-85133242397 07/02/2022    
  • A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models. (Yu Z, Yang X, Dang C, Wu S, Adekkanattu P, Pathak J, George TJ, Hogan WR, Guo Y, Bian J, Wu Y) AMIA Annu Symp Proc 2021;2021:1225-1233 PMID: 35309014 PMCID: PMC8861705 SCOPUS ID: 2-s2.0-85126864874 03/22/2022       7 Citations
  • A Checklist for Reproducible Computational Analysis in Clinical Metabolomics Research. (Du X, Aristizabal-Henao JJ, Garrett TJ, Brochhausen M, Hogan WR, Lemas DJ) Metabolites 2022 Jan 17;12(1) PMID: 35050209 PMCID: PMC8779534 SCOPUS ID: 2-s2.0-85123188714 01/21/2022       9 Citations
  • Identify Cancer Patients at Risk for Heart Failure using Electronic Health Record and Genetic Data (Yu Z, Yang X, Chen Y, Fang R, Hogan WR, Gong Y, Wu Y) Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022 2022:138-142 SCOPUS ID: 2-s2.0-85139073307 01/01/2022       1 Citation
  • Association of Postoperative Undertriage to Hospital Wards With Mortality and Morbidity. (Loftus TJ, Ruppert MM, Ozrazgat-Baslanti T, Balch JA, Efron PA, Tighe PJ, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A) JAMA Netw Open 2021 Nov 01;4(11):e2131669 PMID: 34757412 PMCID: PMC8581722 SCOPUS ID: 2-s2.0-85119343382 11/11/2021       7 Citations
  • The OneFlorida Data Trust: a centralized, translational research data infrastructure of statewide scope. (Hogan WR, Shenkman EA, Robinson T, Carasquillo O, Robinson PS, Essner RZ, Bian J, Lipori G, Harle C, Magoc T, Manini L, Mendoza T, White S, Loiacono A, Hall J, Nelson D) J Am Med Inform Assoc 2022 Mar 15;29(4):686-693 PMID: 34664656 PMCID: PMC8922180 SCOPUS ID: 2-s2.0-85126490266 10/20/2021       17 Citations
  • Extracting social determinants of health from electronic health records using natural language processing: a systematic review. (Patra BG, Sharma MM, Vekaria V, Adekkanattu P, Patterson OV, Glicksberg B, Lepow LA, Ryu E, Biernacka JM, Furmanchuk A, George TJ, Hogan W, Wu Y, Yang X, Bian J, Weissman M, Wickramaratne P, Mann JJ, Olfson M, Campion TR, Weiner M, Pathak J) J Am Med Inform Assoc 2021 Nov 25;28(12):2716-2727 PMID: 34613399 PMCID: PMC8633615 SCOPUS ID: 2-s2.0-85121184813 10/07/2021       54 Citations
  • Aligning Patient Acuity With Resource Intensity After Major Surgery: A Scoping Review. (Loftus TJ, Balch JA, Ruppert MM, Tighe PJ, Hogan WR, Rashidi P, Upchurch GR Jr, Bihorac A) Ann Surg 2022 Feb 01;275(2):332-339 PMID: 34261886 PMCID: PMC8750209 SCOPUS ID: 2-s2.0-85123202507 07/16/2021       4 Citations
  • Hypertension prevalence in the All of Us Research Program among groups traditionally underrepresented in medical research. (Chandler PD, Clark CR, Zhou G, Noel NL, Achilike C, Mendez L, Ramirez AH, Loperena-Cortes R, Mayo K, Cohn E, Ohno-Machado L, Boerwinkle E, Cicek M, Qian J, Schully S, Ratsimbazafy F, Mockrin S, Gebo K, Dedier JJ, Murphy SN, Smoller JW, Karlson EW, All of Us Research Program Investigators) Sci Rep 2021 Jun 22;11(1):12849 PMID: 34158555 PMCID: PMC8219813 SCOPUS ID: 2-s2.0-85109024727 06/24/2021       4 Citations
  • Exploring the feasibility of using real-world data from a large clinical data research network to simulate clinical trials of Alzheimer's disease. (Chen Z, Zhang H, Guo Y, George TJ, Prosperi M, Hogan WR, He Z, Shenkman EA, Wang F, Bian J) NPJ Digit Med 2021 May 14;4(1):84 PMID: 33990663 PMCID: PMC8121837 SCOPUS ID: 2-s2.0-85105879517 05/16/2021       12 Citations
  • Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups. (Guo Y, He X, Lyu T, Zhang H, Wu Y, Yang X, Chen Z, Markham MJ, Modave F, Xie M, Hogan W, Harle CA, Shenkman EA, Bian J) AMIA Annu Symp Proc 2020;2020:514-523 PMID: 33936425 PMCID: PMC8075543 SCOPUS ID: 2-s2.0-85105292692 05/04/2021       10 Citations
  • Semantic standards of external exposome data. (Zhang H, Hu H, Diller M, Hogan WR, Prosperi M, Guo Y, Bian J) Environ Res 2021 Jun;197:111185 PMID: 33901445 PMCID: PMC8597904 SCOPUS ID: 2-s2.0-85105895629 04/27/2021       12 Citations
  • An external exposome-wide association study of COVID-19 mortality in the United States. (Hu H, Zheng Y, Wen X, Smith SS, Nizomov J, Fishe J, Hogan WR, Shenkman EA, Bian J) Sci Total Environ 2021 May 10;768:144832 PMID: 33450687 PMCID: PMC7788319 SCOPUS ID: 2-s2.0-85099129646 01/16/2021       19 Citations
  • Applications of artificial intelligence in drug development using real-world data. (Chen Z, Liu X, Hogan W, Shenkman E, Bian J) Drug Discov Today 2021 May;26(5):1256-1264 PMID: 33358699 PMCID: PMC8626864 SCOPUS ID: 2-s2.0-85098501596 12/29/2020       26 Citations
  • International Classification of Diseases, Tenth Revision, Clinical Modification social determinants of health codes are poorly used in electronic health records. (Guo Y, Chen Z, Xu K, George TJ, Wu Y, Hogan W, Shenkman EA, Bian J) Medicine (Baltimore) 2020 Dec 24;99(52):e23818 PMID: 33350768 PMCID: PMC7769291 SCOPUS ID: 2-s2.0-85099113463 12/23/2020       37 Citations
  • Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data. (Bian J, Lyu T, Loiacono A, Viramontes TM, Lipori G, Guo Y, Wu Y, Prosperi M, George TJ, Harle CA, Shenkman EA, Hogan W) J Am Med Inform Assoc 2020 Dec 09;27(12):1999-2010 PMID: 33166397 PMCID: PMC7727392 SCOPUS ID: 2-s2.0-85098452508 11/10/2020       27 Citations
  • Clinical concept extraction using transformers. (Yang X, Bian J, Hogan WR, Wu Y) J Am Med Inform Assoc 2020 Dec 09;27(12):1935-1942 PMID: 33120431 PMCID: PMC7727351 SCOPUS ID: 2-s2.0-85098465042 10/30/2020       63 Citations
  • A realism-based approach to an ontological representation of symbiotic interactions. (Diller M, Johnson E, Hicks A, Hogan WR) BMC Med Inform Decis Mak 2020 Oct 08;20(1):258 PMID: 33032576 PMCID: PMC7542735 SCOPUS ID: 2-s2.0-85092598494 10/10/2020       1 Citation
  • Optimizing identification of resistant hypertension: Computable phenotype development and validation. (McDonough CW, Babcock K, Chucri K, Crawford DC, Bian J, Modave F, Cooper-DeHoff RM, Hogan WR) Pharmacoepidemiol Drug Saf 2020 Nov;29(11):1393-1401 PMID: 32844549 PMCID: PMC7754782 SCOPUS ID: 2-s2.0-85089827150 08/28/2020       8 Citations
  • Predicting in-hospital mortality of patients with febrile neutropenia using machine learning models. (Du X, Min J, Shah CP, Bishnoi R, Hogan WR, Lemas DJ) Int J Med Inform 2020 Jul;139:104140 PMID: 32325370 PMCID: PMC7255942 SCOPUS ID: 2-s2.0-85083341726 04/24/2020       18 Citations
  • Identifying Cancer Patients at Risk for Heart Failure Using Machine Learning Methods. (Yang X, Gong Y, Waheed N, March K, Bian J, Hogan WR, Wu Y) AMIA Annu Symp Proc 2019;2019:933-941 PMID: 32308890 PMCID: PMC7153053 SCOPUS ID: 2-s2.0-85083755085 04/21/2020       10 Citations
  • Assessing the Validity of a a priori Patient-Trial Generalizability Score using Real-world Data from a Large Clinical Data Research Network: A Colorectal Cancer Clinical Trial Case Study. (Li Q, He Z, Guo Y, Zhang H, George TJ, Hogan W, Charness N, Bian J) AMIA Annu Symp Proc 2019;2019:1101-1110 PMID: 32308907 PMCID: PMC7153072 SCOPUS ID: 2-s2.0-85083755144 04/21/2020       9 Citations
  • Optimizing Antihypertensive Medication Classification in Electronic Health Record-Based Data: Classification System Development and Methodological Comparison. (McDonough CW, Smith SM, Cooper-DeHoff RM, Hogan WR) JMIR Med Inform 2020 Feb 27;8(2):e14777 PMID: 32130152 PMCID: PMC7068459 SCOPUS ID: 2-s2.0-85089823584 03/05/2020       6 Citations
  • Postnatal pediatric systemic antibiotic episodes during the first three years of life are not associated with mode of delivery. (Lemas DJ, Mack JA, Schoch JJ, Cacho N, Plasencia E, Rhoton-Vlasak AS, Neu J, Thompson L, Francois M, Patel K, Hogan WR, Lipori GP, Gurka MJ) PLoS One 2020;15(3):e0229861 PMID: 32130278 PMCID: PMC7055886 SCOPUS ID: 2-s2.0-85081043422 03/05/2020       1 Citation
  • Clinical Trial Generalizability Assessment in the Big Data Era: A Review. (He Z, Tang X, Yang X, Guo Y, George TJ, Charness N, Quan Hem KB, Hogan W, Bian J) Clin Transl Sci 2020 Jul;13(4):675-684 PMID: 32058639 PMCID: PMC7359942 SCOPUS ID: 2-s2.0-85083105920 02/15/2020       43 Citations
  • A Study of Deep Learning Methods for De-identification of Clinical Notes at Cross Institute Settings. (Yang X, Lyu T, Lee CY, Bian J, Hogan WR, Wu Y) IEEE Int Conf Healthc Inform 2019 Jun;2019 PMID: 31879734 PMCID: PMC6932867 SCOPUS ID: 2-s2.0-85075921739 12/28/2019       5 Citations
  • Enhancing the drug ontology with semantically-rich representations of National Drug Codes and RxNorm unique concept identifiers. (Bona JP, Brochhausen M, Hogan WR) BMC Bioinformatics 2019 Dec 23;20(Suppl 21):708 PMID: 31865907 PMCID: PMC6927112 SCOPUS ID: 2-s2.0-85077109458 12/24/2019       4 Citations
  • Combination Antihypertensive Therapy Prescribing and Blood Pressure Control in a Real-World Setting. (Magvanjav O, Cooper-Dehoff RM, McDonough CW, Gong Y, Hogan WR, Johnson JA) Am J Hypertens 2020 Apr 01;33(4):316-324 PMID: 31853537 PMCID: PMC7109351 SCOPUS ID: 2-s2.0-85082780332 12/20/2019       3 Citations
  • A study of deep learning methods for de-identification of clinical notes in cross-institute settings. (Yang X, Lyu T, Li Q, Lee CY, Bian J, Hogan WR, Wu Y) BMC Med Inform Decis Mak 2019 Dec 05;19(Suppl 5):232 PMID: 31801524 PMCID: PMC6894104 SCOPUS ID: 2-s2.0-85075966986 12/06/2019       38 Citations
  • Implementing a hash-based privacy-preserving record linkage tool in the OneFlorida clinical research network (Bian J, Loiacono A, Sura A, Viramontes TM, Lipori G, Guo Y, Shenkman E, Hogan W) JAMIA Open 1 December 2019;2(4):562-569 SCOPUS ID: 2-s2.0-85096235929 12/01/2019       19 Citations
  • Identifying relations of medications with adverse drug events using recurrent convolutional neural networks and gradient boosting. (Yang X, Bian J, Fang R, Bjarnadottir RI, Hogan WR, Wu Y) J Am Med Inform Assoc 2020 Jan 01;27(1):65-72 PMID: 31504605 PMCID: PMC7489076 SCOPUS ID: 2-s2.0-85076585387 09/11/2019       34 Citations
  • Sustainability considerations for clinical and translational research informatics infrastructure. (Obeid JS, Tarczy-Hornoch P, Harris PA, Barnett WK, Anderson NR, Embi PJ, Hogan WR, Bell DS, McIntosh LD, Knosp B, Tachinardi U, Cimino JJ, Wehbe FH) J Clin Transl Sci 2018 Oct;2(5):267-275 PMID: 30828467 PMCID: PMC6390401 03/05/2019    
  • Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials. (Zhang H, He Z, He X, Guo Y, Nelson DR, Modave F, Wu Y, Hogan W, Prosperi M, Bian J) AMIA Annu Symp Proc 2018;2018:1601-1610 PMID: 30815206 PMCID: PMC6371316 SCOPUS ID: 2-s2.0-85062380847 03/01/2019       11 Citations
  • Combine Factual Medical Knowledge and Distributed Word Representation to Improve Clinical Named Entity Recognition. (Wu Y, Yang X, Bian J, Guo Y, Xu H, Hogan W) AMIA Annu Symp Proc 2018;2018:1110-1117 PMID: 30815153 PMCID: PMC6371322 SCOPUS ID: 2-s2.0-85062376980 03/01/2019       24 Citations
  • MADEx: A System for Detecting Medications, Adverse Drug Events, and Their Relations from Clinical Notes. (Yang X, Bian J, Gong Y, Hogan WR, Wu Y) Drug Saf 2019 Jan;42(1):123-133 PMID: 30600484 PMCID: PMC6402874 SCOPUS ID: 2-s2.0-85059513836 01/03/2019       31 Citations
  • Antihypertensive therapy prescribing patterns and correlates of blood pressure control among hypertensive patients with chronic kidney disease. (Magvanjav O, Cooper-DeHoff RM, McDonough CW, Gong Y, Segal MS, Hogan WR, Johnson JA) J Clin Hypertens (Greenwich) 2019 Jan;21(1):91-101 PMID: 30427124 PMCID: PMC6329007 SCOPUS ID: 2-s2.0-85056446085 11/15/2018       13 Citations
  • Objectively measured pediatric obesity prevalence using the OneFlorida Clinical Research Consortium. (Lemas DJ, Cardel MI, Filipp SL, Hall J, Essner RZ, Smith SR, Nadglowski J, Donahoo WT, Cooper-DeHoff RM, Nelson DR, Hogan WR, Shenkman EA, Gurka MJ, Janicke DM) Obes Res Clin Pract 2019;13(1):12-15 PMID: 30391132 PMCID: PMC7861018 SCOPUS ID: 2-s2.0-85055751745 11/06/2018       4 Citations
  • Characterization of adult obesity in Florida using the OneFlorida clinical research consortium. (Filipp SL, Cardel M, Hall J, Essner RZ, Lemas DJ, Janicke DM, Smith SR, Nadglowski J, Troy Donahoo W, Cooper-DeHoff RM, Nelson DR, Hogan WR, Shenkman EA, Gurka MJ) Obes Sci Pract 2018 Aug;4(4):308-317 PMID: 30151226 PMCID: PMC6105705 SCOPUS ID: 2-s2.0-85055752775 08/29/2018       12 Citations
  • OC-2-KB: integrating crowdsourcing into an obesity and cancer knowledge base curation system. (Lossio-Ventura JA, Hogan W, Modave F, Guo Y, He Z, Yang X, Zhang H, Bian J) BMC Med Inform Decis Mak 2018 Jul 23;18(Suppl 2):55 PMID: 30066655 PMCID: PMC6069686 SCOPUS ID: 2-s2.0-85050795534 08/02/2018       13 Citations
  • Comparing and Contrasting A Priori and A Posteriori Generalizability Assessment of Clinical Trials on Type 2 Diabetes Mellitus. (He Z, Gonzalez-Izquierdo A, Denaxas S, Sura A, Guo Y, Hogan WR, Shenkman E, Bian J) AMIA Annu Symp Proc 2017;2017:849-858 PMID: 29854151 PMCID: PMC5977671 SCOPUS ID: 2-s2.0-85058752398 06/02/2018       3 Citations
  • Representing the Aboutness of a Diagnosis. (Hogan W) Stud Health Technol Inform 2018;247:805-809 PMID: 29678072 SCOPUS ID: 2-s2.0-85046534869 04/22/2018       1 Citation
  • Prevalence of Multiple Chronic Conditions Among Older Adults in Florida and the United States: Comparative Analysis of the OneFlorida Data Trust and National Inpatient Sample. (He Z, Bian J, Carretta HJ, Lee J, Hogan WR, Shenkman E, Charness N) J Med Internet Res 2018 Apr 12;20(4):e137 PMID: 29650502 PMCID: PMC5920146 SCOPUS ID: 2-s2.0-85047744824 04/14/2018       47 Citations
  • MySurgeryRisk: Development and Validation of a Machine-learning Risk Algorithm for Major Complications and Death After Surgery. (Bihorac A, Ozrazgat-Baslanti T, Ebadi A, Motaei A, Madkour M, Pardalos PM, Lipori G, Hogan WR, Efron PA, Moore F, Moldawer LL, Wang DZ, Hobson CE, Rashidi P, Li X, Momcilovic P) Ann Surg 2019 Apr;269(4):652-662 PMID: 29489489 PMCID: PMC6110979 SCOPUS ID: 2-s2.0-85055912186 03/01/2018       162 Citations
  • Introducing hypertension facts: Vital sign ontology annotations in the Florida annotated corpus for translational science (Hicks A, Hogan W, Pepine C, Boire N, Herring C, Seppälä S) Proceedings of the 31st International Florida Artificial Intelligence Research Society Conference, FLAIRS 2018 2018:493-499 SCOPUS ID: 2-s2.0-85071956151 01/01/2018       1 Citation
  • OC-2-KB: A software pipeline to build an evidence-based obesity and cancer knowledge base (Lossio-Ventura JA, Hogan W, Modave F, Guo Y, He Z, Hicks A, Bian J) Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017 15 December 2017;2017-January:1284-1287 SCOPUS ID: 2-s2.0-85046041678 12/15/2017       4 Citations
  • Semantics-Powered Healthcare Engineering and Data Analytics. (He Z, Tao C, Bian J, Dumontier M, Hogan WR) J Healthc Eng 2017;2017:7983473 PMID: 29214005 PMCID: PMC5682067 SCOPUS ID: 2-s2.0-85042501582 12/08/2017       13 Citations
  • OneFlorida Clinical Research Consortium: Linking a Clinical and Translational Science Institute With a Community-Based Distributive Medical Education Model. (Shenkman E, Hurt M, Hogan W, Carrasquillo O, Smith S, Brickman A, Nelson D) Acad Med 2018 Mar;93(3):451-455 PMID: 29045273 PMCID: PMC5839715 SCOPUS ID: 2-s2.0-85044326106 10/19/2017       52 Citations
  • The Building Blocks of Interoperability. A Multisite Analysis of Patient Demographic Attributes Available for Matching. (Culbertson A, Goel S, Madden MB, Safaeinili N, Jackson KL, Carton T, Waitman R, Liu M, Krishnamurthy A, Hall L, Cappella N, Visweswaran S, Becich MJ, Applegate R, Bernstam E, Rothman R, Matheny M, Lipori G, Bian J, Hogan W, Bell D, Martin A, Grannis S, Klann J, Sutphen R, O'Hara AB, Kho A) Appl Clin Inform 2017 Apr 05;8(2):322-336 PMID: 28378025 PMCID: PMC6241737 SCOPUS ID: 2-s2.0-85018912311 04/06/2017       10 Citations
  • Therapeutic indications and other use-case-driven updates in the drug ontology: anti-malarials, anti-hypertensives, opioid analgesics, and a large term request. (Hogan WR, Hanna J, Hicks A, Amirova S, Bramblett B, Diller M, Enderez R, Modzelewski T, Vasconcelos M, Delcher C) J Biomed Semantics 2017 Mar 03;8(1):10 PMID: 28253937 PMCID: PMC5335794 SCOPUS ID: 2-s2.0-85014332922 03/04/2017       10 Citations
  • Towards an obesity-cancer knowledge base: Biomedical entity identification and relation detection (Lossio-Ventura JA, Hogan W, Modave F, Hicks A, Hanna J, Guo Y, He Z, Bian J) Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016 17 January 2017:1081-1088 SCOPUS ID: 2-s2.0-85013290744 01/17/2017       16 Citations
  • Ontology of cancer related social-ecological variables (Balasubramanian DK, Khan JZ, Bian J, Guo Y, Hogan WR, Hicks A) CEUR Workshop Proceedings 2017;2137 SCOPUS ID: 2-s2.0-85050494791 01/01/2017    
  • That which we call a pediatrician would by any other name a child treat (or not) (Hicks A, Hogan WR) CEUR Workshop Proceedings 2017;2137 SCOPUS ID: 2-s2.0-85050482611 01/01/2017    
  • Towards a privacy preserving cohort discovery framework for clinical research networks. (Yuan J, Malin B, Modave F, Guo Y, Hogan WR, Shenkman E, Bian J) J Biomed Inform 2017 Feb;66:42-51 PMID: 28007583 PMCID: PMC5316314 SCOPUS ID: 2-s2.0-85007494860 12/23/2016       11 Citations
  • Assessing the Comorbidity Gap between Clinical Studies and Prevalence in Elderly Patient Populations. (He Z, Charness N, Bian J, Hogan WR) IEEE EMBS Int Conf Biomed Health Inform 2016 Feb;2016:136-139 PMID: 27738664 PMCID: PMC5058342 SCOPUS ID: 2-s2.0-84968586386 10/16/2016       11 Citations
  • Diagnosis, misdiagnosis, lucky guess, hearsay, and more: an ontological analysis. (Hogan WR, Ceusters W) J Biomed Semantics 2016 Sep 15;7(1):54 PMID: 27633888 PMCID: PMC5025551 SCOPUS ID: 2-s2.0-84987866656 09/17/2016       10 Citations
  • The Apollo Structured Vocabulary: an OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation. (Hogan WR, Wagner MM, Brochhausen M, Levander J, Brown ST, Millett N, DePasse J, Hanna J) J Biomed Semantics 2016 Aug 18;7:50 PMID: 27538448 PMCID: PMC4989460 SCOPUS ID: 2-s2.0-84982136592 08/20/2016       9 Citations
  • Adding evidence type representation to DIDEO. (Brochhausen M, Empey PE, Schneider J, Hogan WR, Boyce RD) CEUR Workshop Proc 2016 Aug;1747 PMID: 33139971 PMCID: PMC7603805 08/01/2016    
  • The ontology of medically related social entities: recent developments. (Hicks A, Hanna J, Welch D, Brochhausen M, Hogan WR) J Biomed Semantics 2016 Jul 12;7:47 PMID: 27406187 PMCID: PMC4942889 SCOPUS ID: 2-s2.0-84978225125 07/14/2016       27 Citations
  • An accurate and precise representation of drug ingredients. (Hanna J, Bian J, Hogan WR) J Biomed Semantics 2016;7:7 PMID: 27096073 PMCID: PMC4836073 SCOPUS ID: 2-s2.0-84963549038 04/21/2016       8 Citations
  • A semantic web representation of entire populations (Welch D, Hicks A, Hanna J, Hogan WR) CEUR Workshop Proceedings 2016;1747 SCOPUS ID: 2-s2.0-85018775853 01/01/2016    
  • Adding evidence type representation to DIDEO (Brochhausen M, Hogan WR, Empey PE, Schneider J, Boyce RD) CEUR Workshop Proceedings 2016;1747 SCOPUS ID: 2-s2.0-85018744660 01/01/2016       1 Citation
  • Examining healthcare utilization patterns of elderly middle-aged adults in the United States (Zayas CE, He Z, Yuan J, Maldonado-Molina M, Hogan W, Modave F, Guo Y, Bian J) Proceedings of the 29th International Florida Artificial Intelligence Research Society Conference, FLAIRS 2016 2016:361-366 SCOPUS ID: 2-s2.0-85004064346 01/01/2016       28 Citations
  • Mining Twitter as a First Step toward Assessing the Adequacy of Gender Identification Terms on Intake Forms. (Hicks A, Hogan WR, Rutherford M, Malin B, Xie M, Fellbaum C, Yin Z, Fabbri D, Hanna J, Bian J) AMIA Annu Symp Proc 2015;2015:611-20 PMID: 26958196 PMCID: PMC4765681 SCOPUS ID: 2-s2.0-84979630639 01/01/2015       14 Citations
  • An ontological analysis of diagnostic assertions in electronic healthcare records (Ceusters W, Hogan WR) CEUR Workshop Proceedings 2015;1515 SCOPUS ID: 2-s2.0-84960976846 01/01/2015    
  • Formalizing knowledge and evidence about potential drug-drug interactions (Schneider J, Brochhausen M, Rosko S, Ciccarese P, Hogan WR, Malone D, Ning Y, Clark T, Boyce RD) CEUR Workshop Proceedings 2015;1428 SCOPUS ID: 2-s2.0-84948698277 01/01/2015    
  • CollaborationViz: interactive visual exploration of biomedical research collaboration networks. (Bian J, Xie M, Hudson TJ, Eswaran H, Brochhausen M, Hanna J, Hogan WR) PLoS One 2014;9(11):e111928 PMID: 25405477 PMCID: PMC4236011 SCOPUS ID: 2-s2.0-84915748155 11/19/2014       11 Citations
  • Towards a foundational representation of potential drug-drug interaction knowledge. (Brochhausen M, Schneider J, Malone D, Empey PE, Hogan WR, Boyce RD) CEUR Workshop Proc 2014 Oct;1309:16-31 PMID: 33139970 PMCID: PMC7603806 10/01/2014    
  • CLARA: an integrated clinical research administration system. (Bian J, Xie M, Hogan W, Hutchins L, Topaloglu U, Lane C, Holland J, Wells T) J Am Med Inform Assoc 2014 Oct;21(e2):e369-73 PMID: 24778201 PMCID: PMC4173184 SCOPUS ID: 2-s2.0-84908137093 04/30/2014       7 Citations
  • Social network analysis of biomedical research collaboration networks in a CTSA institution. (Bian J, Xie M, Topaloglu U, Hudson T, Eswaran H, Hogan W) J Biomed Inform 2014 Dec;52:130-40 PMID: 24560679 PMCID: PMC4136998 SCOPUS ID: 2-s2.0-84919866627 02/25/2014       43 Citations
  • Apollo: giving application developers a single point of access to public health models using structured vocabularies and Web services. (Wagner MM, Levander JD, Brown S, Hogan WR, Millett N, Hanna J) AMIA Annu Symp Proc 2013;2013:1415-24 PMID: 24551417 PMCID: PMC3900155 SCOPUS ID: 2-s2.0-84901287493 02/20/2014       4 Citations
  • A novel representation of terms related to infectious disease epidemiology for epidemic modeling: The Apollo Structured Vocabulary and pre-existing representations (Brochhausen M, Hanna J, Brown ST, Hogan WR, Wagner MM, Levander JD, Millett NE) CEUR Workshop Proceedings 2014;1327:21-26 SCOPUS ID: 2-s2.0-84926369260 01/01/2014       1 Citation
  • Preface (Hogan WR, Bodenreider O, Boyce RD, Brochhausen M, Malone D, Herrero-Zazo M, Empey P, Dumontier M, Duke J, Ruttenberg A, Weinstein D) CEUR Workshop Proceedings 2014;1309:2-3 SCOPUS ID: 2-s2.0-84925642621 01/01/2014    
  • Towards a foundational representation of potential drug-drug interaction knowledge (Brochhausen M, Schneider J, Malone D, Empey PE, Hogan WR, Boyce RD) CEUR Workshop Proceedings 2014;1309:16-31 SCOPUS ID: 2-s2.0-84925615446 01/01/2014       11 Citations
  • Building a drug ontology based on RxNorm and other sources. (Hanna J, Joseph E, Brochhausen M, Hogan WR) J Biomed Semantics 2013 Dec 18;4(1):44 PMID: 24345026 PMCID: PMC3931349 SCOPUS ID: 2-s2.0-84978127824 12/19/2013       62 Citations
  • Understanding biomedicai research collaborations through social network analysis: A case study (Bian J, Xie M, Topaloglu U, Hudson T, Hogan W) Proceedings - 2013 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2013 2013:9-16 SCOPUS ID: 2-s2.0-84894540407 12/01/2013       2 Citations
  • Developing a semantically rich ontology for the biobank-administration domain. (Brochhausen M, Fransson MN, Kanaskar NV, Eriksson M, Merino-Martinez R, Hall RA, Norlin L, Kjellqvist S, Hortlund M, Topaloglu U, Hogan WR, Litton JE) J Biomed Semantics 2013 Oct 08;4(1):23 PMID: 24103726 PMCID: PMC4021870 SCOPUS ID: 2-s2.0-84978044432 10/10/2013       24 Citations
  • The core clinical protocol ontology (C2PO): A realist ontology for representing the recommendations within clinical guidelines. (Slaughter L, Brochhausen M, Hogan W, Nytrø Ø) Stud Health Technol Inform 2013;192:997 PMID: 23920771 SCOPUS ID: 2-s2.0-84894379245 08/08/2013       1 Citation
  • Towards a Consistent and Scientifically Accurate Drug Ontology. (Hogan WR, Hanna J, Joseph E, Brochhausen M) CEUR Workshop Proc 2013;1060:68-73 PMID: 27867326 PMCID: PMC5111807 01/01/2013    
  • Building a drug ontology based on rxnorm and other sources (Hanna J, Joseph E, Brochhausen M, Hogan WR) CEUR Workshop Proceedings 2013;1061 SCOPUS ID: 2-s2.0-84924710162 01/01/2013    
  • Maintaining the drug ontology: An open-source, structured product label API for the JVM (Hall RA, Hanna J, Hogan WR) CEUR Workshop Proceedings 2013;1061 SCOPUS ID: 2-s2.0-84924678591 01/01/2013    
  • Towards a consistent and scientifically accurate drug ontology (Hogan WR, Hanna J, Joseph E, Brochhausen M) CEUR Workshop Proceedings 2013;1060:68-73 SCOPUS ID: 2-s2.0-84922823529 01/01/2013       14 Citations
  • A demonstration of entity identity information management applied to demographic data in a Referent tracking system (Chen C, Hanna J, Talburt JR, Brochhausen M, Hogan WR) CEUR Workshop Proceedings 2013;1060:136-137 SCOPUS ID: 2-s2.0-84922820626 01/01/2013       1 Citation
  • Simplifying MIREOT: A MIREOT Protégé plugin (Hanna J, Chen C, Crow WA, Hall R, Liu J, Pendurthi T, Schmidt T, Jennings SF, Brochhausen M, Hogan W) CEUR Workshop Proceedings 2012;914:25-28 SCOPUS ID: 2-s2.0-84893288756 12/01/2012       4 Citations
  • Prescription-acquired acetaminophen use and the risk of asthma in adults: a case-control study. (Kelkar M, Cleves MA, Foster HR, Hogan WR, James LP, Martin BC) Ann Pharmacother 2012 Dec;46(12):1598-608 PMID: 23170033 PMCID: PMC3793244 SCOPUS ID: 2-s2.0-84872255923 11/22/2012       8 Citations
  • Evidence of community structure in biomedical research grant collaborations. (Nagarajan R, Kalinka AT, Hogan WR) J Biomed Inform 2013 Feb;46(1):40-6 PMID: 22981843 PMCID: PMC4121986 SCOPUS ID: 2-s2.0-84873192414 09/18/2012       25 Citations
  • Acute and chronic acetaminophen use and renal disease: a case-control study using pharmacy and medical claims. (Kelkar M, Cleves MA, Foster HR, Hogan WR, James LP, Martin BC) J Manag Care Pharm 2012 Apr;18(3):234-46 PMID: 22468732 PMCID: PMC4000171 SCOPUS ID: 2-s2.0-84860765311 04/04/2012       21 Citations
  • Temporal evolution of biomedical research grant collaborations across multiple scales--a CTSA baseline study. (Nagarajan R, Lowery CL, Hogan WR) AMIA Annu Symp Proc 2011;2011:987-93 PMID: 22195158 PMCID: PMC3243257 SCOPUS ID: 2-s2.0-84874207880 12/24/2011       12 Citations
  • Representing the reality underlying demographic data (Hogan WR, Garimalla S, Tariq SA) CEUR Workshop Proceedings 2011;833:147-152 SCOPUS ID: 2-s2.0-84891955205 12/01/2011       5 Citations
  • Representing local identifiers in a referent-tracking system (Hogan WR, Garimalla S, Tariq SA, Ceusters W) CEUR Workshop Proceedings 2011;833:252-254 SCOPUS ID: 2-s2.0-84891924546 12/01/2011       2 Citations
  • Measuring the Information Gain of Diagnosis vs. Diagnosis Category Coding. (Hogan WR, Slee VN) AMIA Annu Symp Proc 2010 Nov 13;2010:306-10 PMID: 21346990 PMCID: PMC3041394 SCOPUS ID: 2-s2.0-84964923634 02/25/2011       5 Citations
  • The use of semantic distance metrics to support ontology audit. (Wang J, Day R, Visweswaran S, Hogan W) AMIA Annu Symp Proc 2010 Nov 13;2010:842-6 PMID: 21347097 PMCID: PMC3041307 SCOPUS ID: 2-s2.0-84983036749 02/25/2011    
  • Results: Survey of pediatric urology electronic medical records use and perspectives (Canon SJ, Purifoy JA, Heulitt GM, Hogan W, Swearingen C, Williams M, Alpert S, Young D) Journal of Urology October 2011;186(4 SUPPL.):1740-1745 SCOPUS ID: 2-s2.0-80052715573 01/01/2011    
  • To what entities does an ICD-9-CM code refer? A realist approach (Hogan WR) CEUR Workshop Proceedings 2010;754 SCOPUS ID: 2-s2.0-84872836819 12/01/2010    
  • Natural Language Processing methods and systems for biomedical ontology learning. (Liu K, Hogan WR, Crowley RS) J Biomed Inform 2011 Feb;44(1):163-79 PMID: 20647054 PMCID: PMC2990796 SCOPUS ID: 2-s2.0-79952012674 07/22/2010       115 Citations
  • Towards an ontological theory of substance intolerance and hypersensitivity. (Hogan WR) J Biomed Inform 2011 Feb;44(1):26-34 PMID: 20152933 PMCID: PMC2888796 SCOPUS ID: 2-s2.0-79952020322 02/16/2010       5 Citations
  • Measuring the effect of commuting on the performance of the Bayesian Aerosol Release Detector. (Cami A, Wallstrom GL, Hogan WR) BMC Med Inform Decis Mak 2009 Nov 03;9 Suppl 1(Suppl 1):S7 PMID: 19891801 PMCID: PMC2773922 SCOPUS ID: 2-s2.0-72449139078 11/26/2009       6 Citations
  • Knowledge-based variable selection for learning rules from proteomic data. (Lustgarten JL, Visweswaran S, Bowser RP, Hogan WR, Gopalakrishnan V) BMC Bioinformatics 2009 Sep 17;10 Suppl 9(Suppl 9):S16 PMID: 19761570 PMCID: PMC2745687 SCOPUS ID: 2-s2.0-70349871043 09/26/2009       3 Citations
  • Mining aggregates of over-the-counter products for syndromic surveillance. (Cami A, Wallstrom GL, Fowlkes AL, Panozzo CA, Hogan WR) Pattern Recognit Lett 2009 Feb 01;30(3):255-266 PMID: 20383287 PMCID: PMC2851104 SCOPUS ID: 2-s2.0-57249088958 02/01/2009       3 Citations
  • A temporal extension of the Bayesian aerosol release detector (Kong X, Wallstrom GL, Hogan WR) Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2008;5354 LNBI:97-107 SCOPUS ID: 2-s2.0-58749093023 12/01/2008       1 Citation
  • Integrating a commuting model with the Bayesian aerosol release detector (Cami A, Wallstrom GL, Hogan WR) Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2008;5354 LNBI:85-96 SCOPUS ID: 2-s2.0-58549085394 12/01/2008       3 Citations
  • Effect of commuting on the detection and characterization performance of the Bayesian aerosol release detector (Cami A, Wallstrom GL, Hogan WR) Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2008:91-98 SCOPUS ID: 2-s2.0-58049151373 12/01/2008       2 Citations
  • Using a novel resource to decrease proteomic biomarker identification time. (Lustgarten JL, Visweswaran S, Grover H, Kimmel CP, Ryberg H, Bowser RP, Gopalakrishnan V, Hogan WR) AMIA Annu Symp Proc 2008 Nov 06:1033 PMID: 18999243 SCOPUS ID: 2-s2.0-73949085776 11/13/2008    
  • EPO-KB: a searchable knowledge base of biomarker to protein links. (Lustgarten JL, Kimmel C, Ryberg H, Hogan W) Bioinformatics 2008 Jun 01;24(11):1418-9 PMID: 18400772 PMCID: PMC2567111 SCOPUS ID: 2-s2.0-44449104177 04/11/2008       20 Citations
  • The Bayesian aerosol release detector: an algorithm for detecting and characterizing outbreaks caused by an atmospheric release of Bacillus anthracis. (Hogan WR, Cooper GF, Wallstrom GL, Wagner MM, Depinay JM) Stat Med 2007 Dec 20;26(29):5225-52 PMID: 17948918 SCOPUS ID: 2-s2.0-37349120066 10/24/2007       32 Citations
  • Unsupervised clustering of over-the-counter healthcare products into product categories. (Wallstrom GL, Hogan WR) J Biomed Inform 2007 Dec;40(6):642-8 PMID: 17509942 PMCID: PMC2170432 SCOPUS ID: 2-s2.0-36049001579 05/19/2007       16 Citations
  • The Healthcare System (Wagner MM, Hogan WR, Aryel RM) Handbook of Biosurveillance 2006:89-109 SCOPUS ID: 2-s2.0-84884464647 12/01/2006       4 Citations
  • Atmospheric Dispersion Modeling in Biosurveillance (Hogan WR) Handbook of Biosurveillance 2006:289-299 SCOPUS ID: 2-s2.0-84884433665 12/01/2006    
  • Information Technology Standards in Biosurveillance (Hogan WR, Wagner MM) Handbook of Biosurveillance 2006:439-452 SCOPUS ID: 2-s2.0-84884432472 12/01/2006       2 Citations
  • Chief Complaints and ICD Codes (Wagner MM, Hogan WR, Chapman WW, Gesteland PH) Handbook of Biosurveillance 2006:333-359 SCOPUS ID: 2-s2.0-79551539030 12/01/2006       8 Citations
  • Sales of Over-the-Counter Healthcare Products (Hogan WR, Wagner MM) Handbook of Biosurveillance 2006:321-331 SCOPUS ID: 2-s2.0-57249093875 12/01/2006       6 Citations
  • A multivariate procedure for identifying correlations between diagnoses and over-the-counter products from historical datasets. (Li R, Wallstrom GL, Hogan WR) AMIA Annu Symp Proc 2005;2005:450-4 PMID: 16779080 PMCID: PMC1560722 SCOPUS ID: 2-s2.0-39049175698 06/17/2006       5 Citations
  • An evaluation of three policies for updating product categories in the National Retail Data Monitor. (Hogan WR, Wallstrom GL, Wagner MM) AMIA Annu Symp Proc 2005;2005:325-9 PMID: 16779055 PMCID: PMC1560721 SCOPUS ID: 2-s2.0-39049188768 06/17/2006       1 Citation
  • Use of multiple data streams to conduct Bayesian biologic surveillance. (Wong WK, Cooper G, Dash D, Levander J, Dowling J, Hogan W, Wagner M) MMWR Suppl 2005 Aug 26;54:63-9 PMID: 16177695 SCOPUS ID: 2-s2.0-25444432039 09/24/2005       17 Citations
  • High-fidelity injection detectability experiments: a tool for evaluating syndromic surveillance systems. (Wallstrom GL, Wagner M, Hogan W) MMWR Suppl 2005 Aug 26;54:85-91 PMID: 16177698 PMCID: PMC3586808 SCOPUS ID: 2-s2.0-25444452158 09/24/2005       18 Citations
  • Algorithms for rapid outbreak detection: a research synthesis. (Buckeridge DL, Burkom H, Campbell M, Hogan WR, Moore AW) J Biomed Inform 2005 Apr;38(2):99-113 PMID: 15797000 SCOPUS ID: 2-s2.0-15944390658 03/31/2005       145 Citations
  • National Retail Data Monitor for public health surveillance. (Wagner MM, Tsui FC, Espino J, Hogan W, Hutman J, Hersh J, Neill D, Moore A, Parks G, Lewis C, Aller R) MMWR Suppl 2004 Sep 24;53:40-2 PMID: 15714625 SCOPUS ID: 2-s2.0-13844256846 02/18/2005       27 Citations
  • Evaluation of syndromic surveillance systems--design of an epidemic simulation model. (Buckeridge DL, Burkom H, Moore A, Pavlin J, Cutchis P, Hogan W) MMWR Suppl 2004 Sep 24;53:137-43 PMID: 15714643 SCOPUS ID: 2-s2.0-13844256837 02/18/2005       57 Citations
  • Analysis of Web access logs for surveillance of influenza. (Johnson HA, Wagner MM, Hogan WR, Chapman W, Olszewski RT, Dowling J, Barnas G) Stud Health Technol Inform 2004;107(Pt 2):1202-6 PMID: 15361003 SCOPUS ID: 2-s2.0-21644487468 09/14/2004       33 Citations
  • Detection of outbreaks from time series data using wavelet transform. (Zhang J, Tsui F-, Wagner MM, Hogan WR) AMIA Annu Symp Proc 2003;2003:748-52 PMID: 14728273 PMCID: PMC1479935 SCOPUS ID: 2-s2.0-15944427330 01/20/2004       40 Citations
  • A framework for infection control surveillance using association rules. (Ma L, Tsui FC, Hogan WR, Wagner MM, Ma H) AMIA Annu Symp Proc 2003;2003:410-4 PMID: 14728205 PMCID: PMC1480000 SCOPUS ID: 2-s2.0-16544394919 01/20/2004       28 Citations
  • Telephone triage: a timely data source for surveillance of influenza-like diseases. (Espino JU, Hogan WR, Wagner MM) AMIA Annu Symp Proc 2003;2003:215-9 PMID: 14728165 PMCID: PMC1480215 SCOPUS ID: 2-s2.0-16544375294 01/20/2004       56 Citations
  • Detection of pediatric respiratory and gastrointestinal outbreaks from free-text chief complaints. (Ivanov O, Gesteland PH, Hogan W, Mundorff MB, Wagner MM) AMIA Annu Symp Proc 2003;2003:318-22 PMID: 14728186 PMCID: PMC1480317 SCOPUS ID: 2-s2.0-2342591168 01/20/2004       28 Citations
  • Detection of pediatric respiratory and diarrheal outbreaks from sales of over-the-counter electrolyte products. (Hogan WR, Tsui FC, Ivanov O, Gesteland PH, Grannis S, Overhage JM, Robinson JM, Wagner MM, Indiana-Pennsylvania-Utah Collaboration) J Am Med Inform Assoc 2003;10(6):555-62 PMID: 12925542 PMCID: PMC264433 SCOPUS ID: 2-s2.0-0242412539 08/20/2003       59 Citations
  • Design of a national retail data monitor for public health surveillance. (Wagner MM, Robinson JM, Tsui FC, Espino JU, Hogan WR) J Am Med Inform Assoc 2003;10(5):409-18 PMID: 12807802 PMCID: PMC212777 SCOPUS ID: 2-s2.0-0042528277 06/17/2003       54 Citations
  • Common medical terminology comes of age, Part Two: Current code and terminology sets--strengths and weaknesses. (Rose JS, Fisch BJ, Hogan WR, Levy B, Marshall P, Thomas DR, Kirkley D) J Healthc Inf Manag 2001;15(3):319-30 PMID: 11642148 SCOPUS ID: 2-s2.0-0035465136 10/20/2001       7 Citations
  • Common medical terminology comes of age, Part One: Standard language improves healthcare quality. (Rose JS, Fisch BJ, Hogan WR, Levy B, Marshal P, Thomas DR, Kirkley D) J Healthc Inf Manag 2001;15(3):307-18 PMID: 11642147 SCOPUS ID: 2-s2.0-0035462426 10/20/2001       13 Citations
  • Soundbites and snapshots: what is a day? (Hogan WR, Martich GD) Crit Care Med 2000 Jun;28(6):2169-70 PMID: 10890701 SCOPUS ID: 2-s2.0-0033918876 07/13/2000       1 Citation
  • A feasibility study of two methods for end-user configuration of a clinical event monitor. (Tsui FC, Wagner MM, Wilbright W, Tse A, Hogan WR) Proc AMIA Symp 1999:975-8 PMID: 10566506 PMCID: PMC2232807 SCOPUS ID: 2-s2.0-0033257745 11/24/1999       1 Citation
  • The use of an explanation algorithm in a clinical event monitor. (Hogan WR, Wagner MM) Proc AMIA Symp 1999:281-5 PMID: 10566365 PMCID: PMC2232853 SCOPUS ID: 2-s2.0-0033257848 11/24/1999       1 Citation
  • Optimal use of communication channels in clinical event monitoring. (Hogan WR, Wagner MM) Proc AMIA Symp 1998:617-21 PMID: 9929293 PMCID: PMC2232268 SCOPUS ID: 2-s2.0-0032240477 02/03/1999       4 Citations
  • Preferences of interns and residents for E-mail, paging, or traditional methods for the delivery of different types of clinical information. (Wagner MM, Eisenstadt SA, Hogan WR, Pankaskie MC) Proc AMIA Symp 1998:140-4 PMID: 9929198 PMCID: PMC2232308 SCOPUS ID: 2-s2.0-0032247254 02/03/1999       15 Citations
  • Mobile workers in healthcare and their information needs: are 2-way pagers the answer? (Eisenstadt SA, Wagner MM, Hogan WR, Pankaskie MC, Tsui FC, Wilbright W) Proc AMIA Symp 1998:135-9 PMID: 9929197 PMCID: PMC2232166 SCOPUS ID: 2-s2.0-0032247559 02/03/1999       33 Citations
  • Accuracy of data in computer-based patient records. (Hogan WR, Wagner MM) J Am Med Inform Assoc 1997;4(5):342-55 PMID: 9292840 PMCID: PMC61252 SCOPUS ID: 2-s2.0-0031230270 09/18/1997       285 Citations
  • Clinical event monitoring at the University of Pittsburgh. (Wagner MM, Pankaskie M, Hogan W, Tsui FC, Eisenstadt SA, Rodriguez E, Vries JK) Proc AMIA Annu Fall Symp 1997:188-92 PMID: 9357614 PMCID: PMC2233316 SCOPUS ID: 2-s2.0-0347840401 01/01/1997       11 Citations
  • The accuracy of medication data in an outpatient electronic medical record. (Wagner MM, Hogan WR) J Am Med Inform Assoc 1996;3(3):234-44 PMID: 8723614 PMCID: PMC116305 SCOPUS ID: 2-s2.0-57349200733 05/01/1996       99 Citations
  • Free-text fields change the meaning of coded data. (Hogan WR, Wagner MM) Proc AMIA Annu Fall Symp 1996:517-21 PMID: 8947720 PMCID: PMC2233180 SCOPUS ID: 2-s2.0-0030334073 01/01/1996       23 Citations
  • Using belief networks to enhance sharing of medical knowledge between sites with variations in data accuracy. (Hogan WR, Wagner MM) Proc Annu Symp Comput Appl Med Care 1995:218-22 PMID: 8563271 PMCID: PMC2579087 SCOPUS ID: 2-s2.0-0029445033 01/01/1995       3 Citations
  • Last update: 02/17/2024