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Single-Cell Transcriptomic Analysis. Compr Physiol 2020 Mar 12;10(2):767-783

Date

03/13/2020

Pubmed ID

32163201

DOI

10.1002/cphy.c190037

Scopus ID

2-s2.0-85081944090 (requires institutional sign-in at Scopus site)   6 Citations

Abstract

Single-cell sequencing measures the sequence information from individual cells using optimized single-cell isolation protocols and next-generation sequencing technologies. Recent advancement in single-cell sequencing has transformed biomedical research, providing insights into diverse biological processes such as mammalian development, immune system function, cellular diversity and heterogeneity, and disease pathogenesis. In this article, we introduce and describe popular commercial platforms for single-cell RNA sequencing, general workflow for data analysis, repositories and databases, and applications for these approaches in biomedical research. © 2020 American Physiological Society. Compr Physiol 10:767-783, 2020.

Author List

Zheng Z, Chen E, Lu W, Mouradian G, Hodges M, Liang M, Liu P, Lu Y

Authors

Matthew R. Hodges PhD Professor in the Physiology department at Medical College of Wisconsin
Mingyu Liang PhD Vice Chair, Center Director, Professor in the Physiology department at Medical College of Wisconsin
Pengyuan Liu PhD Adjunct Professor in the Physiology department at Medical College of Wisconsin
Gary C. Mouradian PhD Assistant Professor in the Physiology department at Medical College of Wisconsin




MESH terms used to index this publication - Major topics in bold

Animals
Biomedical Research
Computational Biology
Humans
Sequence Analysis, RNA
Single-Cell Analysis
Transcriptome