Medical College of Wisconsin
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Samantha N. Atkinson PhD

Samantha N. Atkinson PhD profile photo picture

Bioinformatics Analyst III

Institution: Medical College of Wisconsin
Department: Microbiology and Immunology

Member of the Center for Microbiome Research

Publications (22)

  • Sleeve Gastrectomy Protects Against Hypertension in Rats due to Changes in the Gut Microbiome. (Barron M, Fernando DG, Atkinson SN, Kirby J, Kindel TL) J Surg Res 2024 Sep;301:118-126 PMID: 38925098 SCOPUS ID: 2-s2.0-85196756485 06/27/2024    
  • Differences in intestinal bacteria in traumatic injury survivors with and without probable posttraumatic stress disorder. (Geier TJ, Atkinson SN, Pan AY, Mantz-Wichman M, Jazinski-Chambers K, Hillard CJ, deRoon-Cassini TA) J Affect Disord 2024 Sep 15;361:528-535 PMID: 38914163 SCOPUS ID: 2-s2.0-85196827087 06/25/2024    
  • Reciprocal regulation of enterococcal cephalosporin resistance by products of the autoregulated yvcJ-glmR-yvcL operon enhances fitness during cephalosporin exposure. (Djorić D, Atkinson SN, Kristich CJ) PLoS Genet 2024 Mar;20(3):e1011215 PMID: 38512984 PMCID: PMC10986989 SCOPUS ID: 2-s2.0-85188462913 03/21/2024    
  • A serum-induced gene signature in hepatocytes is associated with pediatric nonalcoholic fatty liver disease. (Hang Nghiem-Rao T, Johnson JS, Pan A, Atkinson SN, Behling C, Simpson PM, Holtz ML, Weinstock GM, Schwimmer JB, Salzman NH) J Pediatr Gastroenterol Nutr 2024 Apr;78(4):886-897 PMID: 38390691 SCOPUS ID: 2-s2.0-85189912724 02/23/2024    
  • Thiocillin contributes to the ecological fitness of Bacillus cereus ATCC 14579 during interspecies interactions with Myxococcus xanthus. (Müller S, DeLeon O, Atkinson SN, Saravia F, Kellogg S, Shank EA, Kirby JR) Front Microbiol 2023;14:1295262 PMID: 38075900 PMCID: PMC10704990 SCOPUS ID: 2-s2.0-85178917053 12/11/2023    
  • The intestinal microbiome of children with initial and recurrent nephrolithiasis: A pilot study and exploratory analysis. (Ellison JS, Atkinson SN, Hayward M, Hokanson E, Sheridan KR, Salzman N) J Pediatr Urol 2024 Feb;20(1):18-25 PMID: 37802717 PMCID: PMC10922064 SCOPUS ID: 2-s2.0-85173174514 10/07/2023       3 Citations
  • Impact of auricular percutaneous electrical nerve field stimulation on gut microbiome in adolescents with irritable bowel syndrome: A pilot study. (Bora G, Atkinson SN, Pan A, Sood M, Salzman N, Karrento K) J Dig Dis 2023 May;24(5):348-358 PMID: 37448237 SCOPUS ID: 2-s2.0-85167367088 07/14/2023       5 Citations
  • Tuft cells mediate commensal remodeling of the small intestinal antimicrobial landscape. (Fung C, Fraser LM, Barrón GM, Gologorsky MB, Atkinson SN, Gerrick ER, Hayward M, Ziegelbauer J, Li JA, Nico KF, Tyner MDW, DeSchepper LB, Pan A, Salzman NH, Howitt MR) Proc Natl Acad Sci U S A 2023 Jun 06;120(23):e2216908120 PMID: 37253002 PMCID: PMC10266004 SCOPUS ID: 2-s2.0-85160593821 05/30/2023       10 Citations
  • Gut microbiota and metabolites drive chronic sickle cell disease pain. (Sadler KE, Atkinson SN, Ehlers VL, Waltz TB, Hayward M, Rodríguez García DM, Salzman NH, Stucky CL, Brandow AM) bioRxiv 2023 Apr 28 PMID: 37163080 PMCID: PMC10168372 05/10/2023    
  • Lactiplantibacillus plantarum 299v supplementation modulates β-cell ER stress and antioxidative defense pathways and prevents type 1 diabetes in gluten-free BioBreeding rats. (Sargin P, Roethle MF, Jia S, Pant T, Ciecko AE, Atkinson SN, Salzman NH, Teng RJ, Chen YG, Cabrera SM, Hessner MJ) Gut Microbes 2022;14(1):2136467 PMID: 36261888 PMCID: PMC9586621 SCOPUS ID: 2-s2.0-85140364986 10/21/2022       3 Citations
  • Correction: A single, peri-operative antibiotic can persistently alter the post-operative gut microbiome after Roux-en-Y gastric bypass. (Fernando DG, Saravia FL, Atkinson SN, Barron M, Kirby JR, Kindel TL) Surg Endosc 2023 Feb;37(2):1614 PMID: 36097101 SCOPUS ID: 2-s2.0-85137894013 09/13/2022    
  • CroR Regulates Expression of pbp4(5) to Promote Cephalosporin Resistance in Enterococcus faecalis. (Timmler SB, Kellogg SL, Atkinson SN, Little JL, Djorić D, Kristich CJ) mBio 2022 Aug 30;13(4):e0111922 PMID: 35913163 PMCID: PMC9426447 SCOPUS ID: 2-s2.0-85137010276 08/02/2022       5 Citations
  • A single, peri-operative antibiotic can persistently alter the post-operative gut microbiome after Roux-en-Y gastric bypass. (Fernando DG, Saravia FL, Atkinson SN, Barron M, Kirby JR, Kindel TL) Surg Endosc 2023 Feb;37(2):1476-1486 PMID: 35768736 SCOPUS ID: 2-s2.0-85133186635 06/30/2022       1 Citation
  • Probiotic normalization of systemic inflammation in siblings of type 1 diabetes patients: an open-label pilot study. (Cabrera SM, Coren AT, Pant T, Ciecko AE, Jia S, Roethle MF, Simpson PM, Atkinson SN, Salzman NH, Chen YG, Hessner MJ) Sci Rep 2022 Feb 28;12(1):3306 PMID: 35228584 PMCID: PMC8885673 SCOPUS ID: 2-s2.0-85125563972 03/02/2022       18 Citations
  • Nicotinamide Riboside-Conditioned Microbiota Deflects High-Fat Diet-Induced Weight Gain in Mice. (Lozada-Fernández VV, deLeon O, Kellogg SL, Saravia FL, Hadiono MA, Atkinson SN, Grobe JL, Kirby JR) mSystems 2022 Feb 22;7(1):e0023021 PMID: 35076278 PMCID: PMC8788325 SCOPUS ID: 2-s2.0-85123715407 01/26/2022       12 Citations
  • Retinoic Acid Signaling Modulates Recipient Gut Barrier Integrity and Microbiota After Allogeneic Hematopoietic Stem Cell Transplantation in Mice. (Pan P, Atkinson SN, Taylor B, Zhu H, Zhou D, Flejsierowicz P, Wang LS, Morse M, Liu C, Gunsolus IL, Chen X) Front Immunol 2021;12:749002 PMID: 34759928 PMCID: PMC8573259 SCOPUS ID: 2-s2.0-85118722452 11/12/2021       6 Citations
  • Sleeve gastrectomy prevents hypertension associated with unique shifts in the gut microbiome. (Barron M, Atkinson SN, Kirby J, Kindel T) Surg Endosc 2021 Oct;35(10):5461-5467 PMID: 32989546 PMCID: PMC8004532 SCOPUS ID: 2-s2.0-85091609559 09/30/2020       4 Citations
  • Suppressor mutations reveal an NtrC-like response regulator, NmpR, for modulation of Type-IV Pili-dependent motility in Myxococcus xanthus. (Bretl DJ, Ladd KM, Atkinson SN, Müller S, Kirby JR) PLoS Genet 2018 Oct;14(10):e1007714 PMID: 30346960 PMCID: PMC6211767 SCOPUS ID: 2-s2.0-85055910992 10/23/2018       5 Citations
  • Association of Mycobacterium Proteins with Lipid Droplets. (Armstrong RM, Carter DC, Atkinson SN, Terhune SS, Zahrt TC) J Bacteriol 2018 Aug 15;200(16) PMID: 29760207 PMCID: PMC6060360 SCOPUS ID: 2-s2.0-85050494395 05/16/2018       14 Citations
  • The Gut Microbiome, Energy Homeostasis, and Implications for Hypertension. (Riedl RA, Atkinson SN, Burnett CML, Grobe JL, Kirby JR) Curr Hypertens Rep 2017 Apr;19(4):27 PMID: 28316052 PMCID: PMC5773096 SCOPUS ID: 2-s2.0-85015782153 03/21/2017       41 Citations
  • Type IV-pili dependent motility is co-regulated by PilSR and PilS2R2 two-component systems via distinct pathways in Myxococcus xanthus. (Bretl DJ, Müller S, Ladd KM, Atkinson SN, Kirby JR) Mol Microbiol 2016 Oct;102(1):37-53 PMID: 27393239 SCOPUS ID: 2-s2.0-84988461449 07/10/2016       10 Citations
  • Microtubule array reorientation in response to hormones does not involve changes in microtubule nucleation modes at the periclinal cell surface. (Atkinson S, Kirik A, Kirik V) J Exp Bot 2014 Nov;65(20):5867-75 PMID: 25135522 PMCID: PMC4203123 SCOPUS ID: 2-s2.0-84911416694 08/20/2014       10 Citations
    • Last update: 08/28/2024